HL_9QQA_035

3D structure

PDB id

9QQA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ternary complex of translating ribosome, NAC and NMT1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

GUAGUGGUUAUC

Length

12 nucleotides

Bulged bases

9QQA|1|AT|U|16, 9QQA|1|AT|G|17, 9QQA|1|AT|U|20, 9QQA|1|AT|A|21

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QQA|1|AT|G|12
9QQA|1|AT|U|13
9QQA|1|AT|A|14
9QQA|1|AT|G|15
9QQA|1|AT|U|16
9QQA|1|AT|G|17
9QQA|1|AT|G|18
9QQA|1|AT|U|19
9QQA|1|AT|U|20
9QQA|1|AT|A|21
9QQA|1|AT|U|22
9QQA|1|AT|C|23

Current chains

Chain AT

P site Phe tRNA

Nearby chains

Chain B5

Large subunit ribosomal RNA; LSU rRNA

Chain BJ

60S ribosomal protein L11

Chain Bo

Large ribosomal subunit protein eL42