HL_9QQA_041
3D structure
- PDB id
- 9QQA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ternary complex of translating ribosome, NAC and NMT1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- CGCGGUG
- Length
- 7 nucleotides
- Bulged bases
- 9QQA|1|B5|G|134, 9QQA|1|B5|G|135, 9QQA|1|B5|U|136
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9QQA_041 not in the Motif Atlas
- Geometric match to HL_7VTI_001
- Geometric discrepancy: 0.1659
- The information below is about HL_7VTI_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_89167.2
- Basepair signature
- cWW-F-F
- Number of instances in this motif group
- 22
Unit IDs
9QQA|1|B5|C|131
9QQA|1|B5|G|132
9QQA|1|B5|C|133
9QQA|1|B5|G|134
9QQA|1|B5|G|135
9QQA|1|B5|U|136
9QQA|1|B5|G|137
Current chains
- Chain B5
- 28S rRNA
Nearby chains
- Chain B8
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain BN
- Ribosomal protein L15
- Chain Bh
- 60S ribosomal protein L35
- Chain Bj
- Ribosomal protein L37
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