HL_9QQA_061

3D structure

PDB id

9QQA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ternary complex of translating ribosome, NAC and NMT1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

CGAAACG

Length

7 nucleotides

Bulged bases

9QQA|1|B5|C|1707

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9QQA_061 not in the Motif Atlas

Geometric match to HL_4WSM_210

Geometric discrepancy: 0.3783

The information below is about HL_4WSM_210

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_61907.1

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

1

Unit IDs

9QQA|1|B5|C|1702
9QQA|1|B5|G|1703
9QQA|1|B5|A|1704
9QQA|1|B5|A|1705
9QQA|1|B5|A|1706
9QQA|1|B5|C|1707
9QQA|1|B5|G|1708

Current chains

Chain B5

28S rRNA

Nearby chains

Chain Ao

Small ribosomal subunit protein uS19

Chain Ar

Small ribosomal subunit protein uS13