HL_9QQA_082

3D structure

PDB id

9QQA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ternary complex of translating ribosome, NAC and NMT1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

UGAAC(A2M)G

Length

7 nucleotides

Bulged bases

9QQA|1|B5|C|2657

QA status

Modified nucleotides: A2M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9QQA_082 not in the Motif Atlas

Geometric match to HL_8P9A_153

Geometric discrepancy: 0.1393

The information below is about HL_8P9A_153

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

335

Unit IDs

9QQA|1|B5|U|2653
9QQA|1|B5|G|2654
9QQA|1|B5|A|2655
9QQA|1|B5|A|2656
9QQA|1|B5|C|2657
9QQA|1|B5|A2M|2658
9QQA|1|B5|G|2659

Current chains

Chain B5

28S rRNA

Nearby chains

Chain BR

Ribosomal protein L19