HL_9QQA_095
3D structure
- PDB id
- 9QQA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ternary complex of translating ribosome, NAC and NMT1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- CAGAAGGG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9QQA_095 not in the Motif Atlas
- Geometric match to HL_8CRE_056
- Geometric discrepancy: 0.1206
- The information below is about HL_8CRE_056
- Detailed Annotation
- Pseudoknot geometry
- Broad Annotation
- No text annotation
- Motif group
- HL_93324.4
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 24
Unit IDs
9QQA|1|B5|C|4016
9QQA|1|B5|A|4017
9QQA|1|B5|G|4018
9QQA|1|B5|A|4019
9QQA|1|B5|A|4020
9QQA|1|B5|G|4021
9QQA|1|B5|G|4022
9QQA|1|B5|G|4023
Current chains
- Chain B5
- 28S rRNA
Nearby chains
- Chain AT
- Transfer RNA; tRNA
- Chain BI
- 60S ribosomal protein L10
- Chain BT
- 60S ribosomal protein L21
- Chain Bo
- Large ribosomal subunit protein eL42
Coloring options: