HL_9QQB_027

3D structure

PDB id

9QQB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Quaternary complex of a translating ribosome, NAC, NMT1, and NatA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.43 Å

Loop

Sequence

G(PSU)UAAUUC

Length

8 nucleotides

Bulged bases

9QQB|1|A2|U|1372

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9QQB_027 not in the Motif Atlas

Geometric match to HL_8CRE_219

Geometric discrepancy: 0.1263

The information below is about HL_8CRE_219

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_77436.5

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

23

Unit IDs

9QQB|1|A2|G|1367
9QQB|1|A2|PSU|1368
9QQB|1|A2|U|1369
9QQB|1|A2|A|1370
9QQB|1|A2|A|1371
9QQB|1|A2|U|1372
9QQB|1|A2|U|1373
9QQB|1|A2|C|1374

Current chains

Chain A2

18S rRNA

Nearby chains

Chain Aq

Small ribosomal subunit protein eS17