HL_9QQB_030

3D structure

PDB id

9QQB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Quaternary complex of a translating ribosome, NAC, NMT1, and NatA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.43 Å

Loop

Sequence

CGGCAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9QQB_030 not in the Motif Atlas

Geometric match to HL_3E5C_002

Geometric discrepancy: 0.1572

The information below is about HL_3E5C_002

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

9QQB|1|A2|C|1566
9QQB|1|A2|G|1567
9QQB|1|A2|G|1568
9QQB|1|A2|C|1569
9QQB|1|A2|A|1570
9QQB|1|A2|G|1571

Current chains

Chain A2

18S rRNA

Nearby chains

Chain Ao

Small ribosomal subunit protein uS19

Chain Ar

Small ribosomal subunit protein uS13

Chain As

40S ribosomal protein S19