HL_9QQB_061

3D structure

PDB id

9QQB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Quaternary complex of a translating ribosome, NAC, NMT1, and NatA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.43 Å

Loop

Sequence

CGAAACG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9QQB_061 not in the Motif Atlas

Geometric match to HL_4WSM_210

Geometric discrepancy: 0.3907

The information below is about HL_4WSM_210

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_59735.5

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

2

Unit IDs

9QQB|1|B5|C|1702
9QQB|1|B5|G|1703
9QQB|1|B5|A|1704
9QQB|1|B5|A|1705
9QQB|1|B5|A|1706
9QQB|1|B5|C|1707
9QQB|1|B5|G|1708

Current chains

Chain B5

28S rRNA

Nearby chains

Chain Ao

Small ribosomal subunit protein uS19

Chain Ar

Small ribosomal subunit protein uS13