HL_9QQB_066

3D structure

PDB id

9QQB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Quaternary complex of a translating ribosome, NAC, NMT1, and NatA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.43 Å

Loop

Sequence

UGUAACAA

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9QQB_066 not in the Motif Atlas

Geometric match to HL_5J7L_154

Geometric discrepancy: 0.1618

The information below is about HL_5J7L_154

Detailed Annotation

GNRA wlth tandem sheared

Broad Annotation

No text annotation

Motif group

HL_81538.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

9QQB|1|B5|U|1945
9QQB|1|B5|G|1946
9QQB|1|B5|U|1947
9QQB|1|B5|A|1948
9QQB|1|B5|A|1949
9QQB|1|B5|C|1950
9QQB|1|B5|A|1951
9QQB|1|B5|A|1952

Current chains

Chain B5

28S rRNA

Nearby chains

Chain Bs

Large ribosomal subunit protein uL10

Chain Bt

60S ribosomal protein L12