HL_9QQB_081

3D structure

PDB id

9QQB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Quaternary complex of a translating ribosome, NAC, NMT1, and NatA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.43 Å

Loop

Sequence

UGAAC(A2M)G

Length

7 nucleotides

Bulged bases

9QQB|1|B5|C|2657

QA status

Modified nucleotides: A2M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9QQB_081 not in the Motif Atlas

Geometric match to HL_8P9A_153

Geometric discrepancy: 0.1317

The information below is about HL_8P9A_153

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.4

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

399

Unit IDs

9QQB|1|B5|U|2653
9QQB|1|B5|G|2654
9QQB|1|B5|A|2655
9QQB|1|B5|A|2656
9QQB|1|B5|C|2657
9QQB|1|B5|A2M|2658
9QQB|1|B5|G|2659

Current chains

Chain B5

28S rRNA

Nearby chains

Chain BR

Ribosomal protein L19