HL_9QQL_013

3D structure

PDB id

9QQL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse RPS15 P131 Mutant Ribosome POST translocation state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.09 Å

Loop

Sequence

GGGCGGACUGUCCCCAGUGCGCCC

Length

24 nucleotides

Bulged bases

9QQL|1|A2|G|1010, 9QQL|1|A2|U|1011, 9QQL|1|A2|C|1013, 9QQL|1|A2|C|1014

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QQL|1|A2|G|1001
9QQL|1|A2|G|1002
9QQL|1|A2|G|1003
9QQL|1|A2|C|1004
9QQL|1|A2|G|1005
9QQL|1|A2|G|1006
9QQL|1|A2|A|1007
9QQL|1|A2|C|1008
9QQL|1|A2|U|1009
9QQL|1|A2|G|1010
9QQL|1|A2|U|1011
9QQL|1|A2|C|1012
9QQL|1|A2|C|1013
9QQL|1|A2|C|1014
9QQL|1|A2|C|1015
9QQL|1|A2|A|1016
9QQL|1|A2|G|1017
9QQL|1|A2|U|1018
9QQL|1|A2|G|1019
9QQL|1|A2|C|1020
9QQL|1|A2|G|1021
9QQL|1|A2|C|1022
9QQL|1|A2|C|1023
9QQL|1|A2|C|1024

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain B2

5S ribosomal RNA; 5S rRNA

Chain D1

Large ribosomal subunit protein uL16

Chain G2

Large ribosomal subunit protein uL18