9QQL Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_9QQL_001 | 1/A2/37:44 | No text annotation | ||
| HL_9QQL_002 | 1/A2/68:73 | No text annotation | ||
| HL_9QQL_003 | 1/A2/89:95 | No text annotation | ||
| HL_9QQL_005 | 1/A2/204:211 | No text annotation | ||
| HL_9QQL_006 | 1/A2/222:226 | No text annotation | ||
| HL_9QQL_007 | 1/A2/230:238 | No text annotation | ||
| HL_9QQL_008 | 1/A2/289:298 | No text annotation | ||
| HL_9QQL_009 | 1/A2/314:323 | No text annotation | ||
| HL_9QQL_010 | 1/A2/368:373 | No text annotation | ||
| HL_9QQL_011 | 1/A2/393:398 | No text annotation | ||
| HL_9QQL_013 | 1/A2/1001:1024 | No text annotation | ||
| HL_9QQL_015 | 1/A2/1131:1140 | No text annotation | ||
| HL_9QQL_016 | 1/A2/1178:1187 | No text annotation | ||
| HL_9QQL_017 | 1/A2/1203:1208 | No text annotation | ||
| HL_9QQL_020 | 1/A2/1293:1297 | No text annotation | ||
| HL_9QQL_021 | 1/A2/1374:1379 | No text annotation | ||
| HL_9QQL_022 | 1/A2/1406:1415 | No text annotation | ||
| HL_9QQL_023 | 1/A2/1440:1448 | No text annotation | ||
| HL_9QQL_024 | 1/A2/1488:1493 | No text annotation | ||
| HL_9QQL_026 | 1/A2/1618:1625 | No text annotation | ||
| HL_9QQL_027 | 1/A2/1666:1672 | No text annotation | ||
| HL_9QQL_028 | 1/A2/1688:1695 | No text annotation | ||
| HL_9QQL_031 | 1/A2/2012:2016 | No text annotation | ||
| HL_9QQL_032 | 1/A2/2072:2077 | No text annotation | ||
| HL_9QQL_033 | 1/A2/2131:2139 | No text annotation | ||
| HL_9QQL_034 | 1/A2/2175:2181 | No text annotation | ||
| HL_9QQL_035 | 1/A2/2213:2218 | No text annotation | ||
| HL_9QQL_037 | 1/A2/2278:2287 | No text annotation | ||
| HL_9QQL_039 | 1/A2/2333:2338 | No text annotation | ||
| HL_9QQL_040 | 1/A2/2379:2387 | No text annotation | ||
| HL_9QQL_041 | 1/A2/2419:2425 | No text annotation | ||
| HL_9QQL_043 | 1/A2/2493:2497 | No text annotation | ||
| HL_9QQL_044 | 1/A2/2547:2554 | No text annotation | ||
| HL_9QQL_045 | 1/A2/2565:2571 | No text annotation | ||
| HL_9QQL_046 | 1/A2/2627:2632 | No text annotation | ||
| HL_9QQL_048 | 1/A2/3270:3274 | No text annotation | ||
| HL_9QQL_049 | 1/A2/3295:3305 | No text annotation | ||
| HL_9QQL_050 | 1/A2/3324:3330 | No text annotation | ||
| HL_9QQL_051 | 1/A2/3380:3385 | No text annotation | ||
| HL_9QQL_052 | 1/A2/3452:3460 | No text annotation | ||
| HL_9QQL_053 | 1/A2/3529:3538 | No text annotation | ||
| HL_9QQL_057 | 1/A2/3845:3853 | No text annotation | ||
| HL_9QQL_058 | 1/A2/3862:3874 | No text annotation | ||
| HL_9QQL_059 | 1/A2/3902:3910 | No text annotation | ||
| HL_9QQL_060 | 1/A2/3922:3929 | No text annotation | ||
| HL_9QQL_061 | 1/A2/3953:3961 | No text annotation | ||
| HL_9QQL_062 | 1/A2/3973:3978 | No text annotation | ||
| HL_9QQL_063 | 1/A2/4004:4014 | No text annotation | ||
| HL_9QQL_064 | 1/A2/4069:4077 | No text annotation | ||
| HL_9QQL_065 | 1/A2/4126:4133 | No text annotation | ||
| HL_9QQL_066 | 1/A2/4149:4155 | No text annotation | ||
| HL_9QQL_067 | 1/A2/4192:4197 | No text annotation | ||
| HL_9QQL_068 | 1/A2/4255:4260 | No text annotation | ||
| HL_9QQL_069 | 1/A2/4298:4303 | No text annotation | ||
| HL_9QQL_070 | 1/A2/4340:4354 | No text annotation | ||
| HL_9QQL_072 | 1/A2/4551:4560 | No text annotation | ||
| HL_9QQL_073 | 1/A2/4621:4629 | No text annotation | ||
| HL_9QQL_074 | 1/A2/4667:4674 | No text annotation | ||
| HL_9QQL_075 | 1/B2/32:45 | No text annotation | geometric HL_8QYX_071 HL_01182.2 | |
| HL_9QQL_076 | 1/B2/36:41 | No text annotation | homologous HL_7A0S_069 HL_59381.4 | |
| HL_9QQL_077 | 1/B2/86:91 | GNRA | homologous HL_4V9F_072 HL_34789.6 | |
| HL_9QQL_078 | 1/Bv/13:22 | No text annotation | homologous HL_3KFU_004 NA | |
| HL_9QQL_079 | 1/Bv/31:39 | tRNA anticodon loop | homologous HL_7VNV_002 HL_81376.4 | |
| HL_9QQL_080 | 1/Bv/53:61 | T-loop with 2 stacked bulged bases | homologous HL_2DU3_003 HL_33597.6 | |
| HL_9QQL_081 | 1/C2/47:56 | No text annotation | ||
| HL_9QQL_082 | 1/C2/68:90 | No text annotation | ||
| HL_9QQL_083 | 1/C2/107:112 | No text annotation | ||
| HL_9QQL_085 | 1/m2/7:17 | No text annotation | ||
| HL_9QQL_086 | 1/m2/69:80 | No text annotation | ||
| HL_9QQL_087 | 1/m2/156:162 | No text annotation | ||
| HL_9QQL_089 | 1/m2/290:297 | No text annotation | ||
| HL_9QQL_091 | 1/m2/379:389 | No text annotation | ||
| HL_9QQL_092 | 1/m2/418:423 | No text annotation | ||
| HL_9QQL_093 | 1/m2/443:454 | No text annotation | ||
| HL_9QQL_094 | 1/m2/464:469 | No text annotation | ||
| HL_9QQL_095 | 1/m2/500:506 | No text annotation | ||
| HL_9QQL_097 | 1/m2/571:583 | No text annotation | ||
| HL_9QQL_098 | 1/m2/620:625 | No text annotation | ||
| HL_9QQL_099 | 1/m2/822:830 | No text annotation | ||
| HL_9QQL_100 | 1/m2/835:843 | No text annotation | ||
| HL_9QQL_102 | 1/m2/959:968 | No text annotation | ||
| HL_9QQL_103 | 1/m2/996:1001 | No text annotation | ||
| HL_9QQL_104 | 1/m2/1056:1066 | No text annotation | ||
| HL_9QQL_105 | 1/m2/1115:1122 | No text annotation | ||
| HL_9QQL_106 | 1/m2/1143:1148 | No text annotation | ||
| HL_9QQL_107 | 1/m2/1180:1185 | No text annotation | ||
| HL_9QQL_108 | 1/m2/1247:1256 | No text annotation | ||
| HL_9QQL_109 | 1/m2/1297:1306 | No text annotation | ||
| HL_9QQL_110 | 1/m2/1355:1360 | No text annotation | ||
| HL_9QQL_111 | 1/m2/1368:1375 | No text annotation | ||
| HL_9QQL_113 | 1/m2/1462:1468 | No text annotation | ||
| HL_9QQL_114 | 1/m2/1567:1572 | No text annotation | ||
| HL_9QQL_115 | 1/m2/1616:1627 | No text annotation | ||
| HL_9QQL_116 | 1/m2/1660:1668 | No text annotation | ||
| HL_9QQL_118 | 1/m2/1849:1854 | No text annotation |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_9QQL_004 | No text annotation | ||
| HL_9QQL_012 | No text annotation | ||
| HL_9QQL_014 | No text annotation | ||
| HL_9QQL_018 | No text annotation | ||
| HL_9QQL_019 | No text annotation | ||
| HL_9QQL_025 | No text annotation | ||
| HL_9QQL_029 | No text annotation | ||
| HL_9QQL_030 | No text annotation | ||
| HL_9QQL_036 | No text annotation | ||
| HL_9QQL_038 | No text annotation | ||
| HL_9QQL_042 | No text annotation | ||
| HL_9QQL_047 | No text annotation | ||
| HL_9QQL_054 | No text annotation | ||
| HL_9QQL_055 | No text annotation | ||
| HL_9QQL_056 | No text annotation | ||
| HL_9QQL_071 | No text annotation | ||
| HL_9QQL_084 | No text annotation | ||
| HL_9QQL_088 | No text annotation | ||
| HL_9QQL_090 | No text annotation | ||
| HL_9QQL_096 | No text annotation | ||
| HL_9QQL_101 | No text annotation | ||
| HL_9QQL_112 | No text annotation | ||
| HL_9QQL_117 | No text annotation | ||
| HL_9QQL_119 | No text annotation | ||
| HL_9QQL_120 | No text annotation | ||
| HL_9QQL_121 | T-loop with 2 stacked bulged bases |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_9QQL_001 | 1/A2/6:7, 1/C2/149:151 | No text annotation | ||
| IL_9QQL_002 | 1/A2/12:14, 1/C2/143:144 | No text annotation | ||
| IL_9QQL_003 | 1/A2/16:18, 1/C2/139:141 | No text annotation | ||
| IL_9QQL_004 | 1/A2/26:27, 1/A2/55:57 | No text annotation | ||
| IL_9QQL_005 | 1/A2/30:37, 1/A2/44:52 | No text annotation | ||
| IL_9QQL_006 | 1/A2/81:88, 1/A2/96:102 | No text annotation | ||
| IL_9QQL_007 | 1/A2/118:122, 1/A2/147:153 | No text annotation | ||
| IL_9QQL_008 | 1/A2/125:126, 1/A2/142:144 | No text annotation | ||
| IL_9QQL_009 | 1/A2/168:173, 1/A2/263:267 | No text annotation | ||
| IL_9QQL_011 | 1/A2/182:189, 1/A2/252:255 | No text annotation | ||
| IL_9QQL_012 | 1/A2/195:196, 1/A2/244:246 | No text annotation | ||
| IL_9QQL_013 | 1/A2/199:201, 1/A2/214:215 | No text annotation | ||
| IL_9QQL_014 | 1/A2/339:342, 1/C2/32:33 | No text annotation | ||
| IL_9QQL_015 | 1/A2/348:350, 1/C2/25:26 | No text annotation | ||
| IL_9QQL_016 | 1/A2/387:390, 1/A2/401:414 | No text annotation | ||
| IL_9QQL_017 | 1/A2/415:421, 1/C2/13:19 | No text annotation | ||
| IL_9QQL_018 | 1/A2/443:446, 1/A2/1114:1118 | No text annotation | ||
| IL_9QQL_019 | 1/A2/448:450, 1/A2/1111:1112 | No text annotation | ||
| IL_9QQL_020 | 1/A2/459:460, 1/A2/702:704 | No text annotation | ||
| IL_9QQL_021 | 1/A2/462:464, 1/A2/698:700 | No text annotation | ||
| IL_9QQL_022 | 1/A2/466:472, 1/A2/689:696 | No text annotation | ||
| IL_9QQL_023 | 1/A2/481:486, 1/A2/678:680 | No text annotation | ||
| IL_9QQL_024 | 1/A2/488:491, 1/A2/671:676 | No text annotation | ||
| IL_9QQL_025 | 1/A2/491:494, 1/A2/668:671 | No text annotation | ||
| IL_9QQL_026 | 1/A2/498:500, 1/A2/663:664 | No text annotation | ||
| IL_9QQL_027 | 1/A2/509:511, 1/A2/657:658 | No text annotation | ||
| IL_9QQL_029 | 1/A2/716:717, 1/A2/1100:1102 | No text annotation | ||
| IL_9QQL_030 | 1/A2/730:731, 1/A2/840:843 | No text annotation | ||
| IL_9QQL_031 | 1/A2/734:738, 1/A2/836:837 | No text annotation | ||
| IL_9QQL_032 | 1/A2/739:741, 1/A2/827:835 | No text annotation | ||
| IL_9QQL_034 | 1/A2/747:749, 1/A2/821:822 | No text annotation | ||
| IL_9QQL_035 | 1/A2/752:759, 1/A2/810:818 | No text annotation | ||
| IL_9QQL_038 | 1/A2/931:934, 1/A2/1054:1060 | No text annotation | ||
| IL_9QQL_042 | 1/A2/941:942, 1/A2/1042:1044 | No text annotation | ||
| IL_9QQL_045 | 1/A2/1171:1174, 1/A2/1193:1196 | No text annotation | ||
| IL_9QQL_046 | 1/A2/1174:1175, 1/A2/1190:1193 | No text annotation | ||
| IL_9QQL_047 | 1/A2/1238:1242, 1/A2/1268:1273 | No text annotation | ||
| IL_9QQL_048 | 1/A2/1244:1247, 1/A2/1263:1266 | No text annotation | ||
| IL_9QQL_049 | 1/A2/1280:1281, 1/A2/1309:1311 | No text annotation | ||
| IL_9QQL_050 | 1/A2/1287:1289, 1/A2/1302:1303 | No text annotation | ||
| IL_9QQL_051 | 1/A2/1292:1293, 1/A2/1297:1299 | No text annotation | ||
| IL_9QQL_052 | 1/A2/1333:1335, 1/A2/1468:1470 | No text annotation | ||
| IL_9QQL_053 | 1/A2/1335:1339, 1/A2/1461:1468 | No text annotation | ||
| IL_9QQL_054 | 1/A2/1358:1359, 1/A2/1425:1427 | No text annotation | ||
| IL_9QQL_055 | 1/A2/1363:1364, 1/A2/1389:1391 | No text annotation | ||
| IL_9QQL_056 | 1/A2/1364:1368, 1/A2/1385:1389 | No text annotation | ||
| IL_9QQL_057 | 1/A2/1399:1402, 1/A2/1418:1420 | No text annotation | ||
| IL_9QQL_058 | 1/A2/1403:1405, 1/A2/1416:1417 | No text annotation | ||
| IL_9QQL_059 | 1/A2/1437:1439, 1/A2/1449:1453 | No text annotation | ||
| IL_9QQL_060 | 1/A2/1484:1486, 1/A2/1495:1497 | No text annotation | ||
| IL_9QQL_061 | 1/A2/1499:1501, 1/A2/1650:1653 | No text annotation | ||
| IL_9QQL_062 | 1/A2/1507:1523, 1/A2/1643:1644 | No text annotation | ||
| IL_9QQL_063 | 1/A2/1525:1527, 1/A2/1640:1641 | No text annotation | ||
| IL_9QQL_064 | 1/A2/1533:1539, 1/A2/1594:1600 | No text annotation | ||
| IL_9QQL_065 | 1/A2/1539:1540, 1/A2/1592:1594 | No text annotation | ||
| IL_9QQL_066 | 1/A2/1541:1546, 1/A2/1588:1591 | No text annotation | ||
| IL_9QQL_067 | 1/A2/1548:1551, 1/A2/1583:1586 | No text annotation | ||
| IL_9QQL_068 | 1/A2/1551:1553, 1/A2/1581:1583 | No text annotation | ||
| IL_9QQL_069 | 1/A2/1556:1558, 1/A2/1577:1578 | No text annotation | ||
| IL_9QQL_071 | 1/A2/1616:1618, 1/A2/1625:1626 | No text annotation | ||
| IL_9QQL_072 | 1/A2/1660:1662, 1/A2/1676:1678 | No text annotation | ||
| IL_9QQL_074 | 1/A2/1707:1711, 1/A2/1869:1873 | No text annotation | ||
| IL_9QQL_075 | 1/A2/1713:1720, 1/A2/1866:1867 | No text annotation | ||
| IL_9QQL_076 | 1/A2/1720:1722, 1/A2/1865:1866 | No text annotation | ||
| IL_9QQL_077 | 1/A2/1722:1724, 1/A2/1864:1865 | No text annotation | ||
| IL_9QQL_078 | 1/A2/1728:1735, 1/A2/1855:1860 | No text annotation | ||
| IL_9QQL_079 | 1/A2/1735:1746, 1/A2/1840:1855 | No text annotation | ||
| IL_9QQL_080 | 1/A2/1748:1750, 1/A2/1837:1838 | No text annotation | ||
| IL_9QQL_082 | 1/A2/1885:1887, 1/A2/2027:2028 | No text annotation | ||
| IL_9QQL_083 | 1/A2/2045:2047, 1/A2/2097:2100 | No text annotation | ||
| IL_9QQL_084 | 1/A2/2054:2056, 1/A2/2089:2090 | No text annotation | ||
| IL_9QQL_085 | 1/A2/2057:2064, 1/A2/2084:2088 | No text annotation | ||
| IL_9QQL_086 | 1/A2/2067:2069, 1/A2/2080:2081 | No text annotation | ||
| IL_9QQL_087 | 1/A2/2113:2119, 1/A2/3514:3519 | No text annotation | ||
| IL_9QQL_088 | 1/A2/2170:2174, 1/A2/2182:2184 | No text annotation | ||
| IL_9QQL_089 | 1/A2/2201:2205, 1/A2/2264:2269 | No text annotation | ||
| IL_9QQL_090 | 1/A2/2232:2234, 1/A2/2254:2255 | No text annotation | ||
| IL_9QQL_091 | 1/A2/2297:2303, 1/A2/2526:2529 | No text annotation | ||
| IL_9QQL_092 | 1/A2/2304:2305, 1/A2/2523:2525 | No text annotation | ||
| IL_9QQL_093 | 1/A2/2344:2348, 1/A2/2507:2511 | No text annotation | ||
| IL_9QQL_094 | 1/A2/2368:2369, 1/A2/2479:2481 | No text annotation | ||
| IL_9QQL_095 | 1/A2/2369:2370, 1/A2/2477:2479 | No text annotation | ||
| IL_9QQL_096 | 1/A2/2401:2403, 1/A2/2440:2443 | No text annotation | ||
| IL_9QQL_097 | 1/A2/2406:2408, 1/A2/2436:2437 | No text annotation | ||
| IL_9QQL_098 | 1/A2/2411:2417, 1/A2/2427:2433 | No text annotation | ||
| IL_9QQL_100 | 1/A2/2587:2593, 1/A2/3506:3509 | No text annotation | ||
| IL_9QQL_101 | 1/A2/2599:2601, 1/A2/3498:3500 | No text annotation | ||
| IL_9QQL_102 | 1/A2/2602:2605, 1/A2/3496:3497 | No text annotation | ||
| IL_9QQL_103 | 1/A2/2602:2610, 1/A2/3493:3497 | No text annotation | ||
| IL_9QQL_104 | 1/A2/2605:2610, 1/A2/3493:3496 | No text annotation | ||
| IL_9QQL_105 | 1/A2/2622:2627, 1/A2/2632:2638 | No text annotation | ||
| IL_9QQL_106 | 1/A2/2644:2646, 1/A2/3266:3268 | No text annotation | ||
| IL_9QQL_107 | 1/A2/2651:2652, 1/A2/3258:3261 | No text annotation | ||
| IL_9QQL_108 | 1/A2/3288:3289, 1/A2/3483:3485 | No text annotation | ||
| IL_9QQL_109 | 1/A2/3316:3321, 1/A2/3333:3340 | No text annotation | ||
| IL_9QQL_110 | 1/A2/3356:3359, 1/A2/3405:3406 | No text annotation | ||
| IL_9QQL_111 | 1/A2/3360:3361, 1/A2/3401:3404 | No text annotation | ||
| IL_9QQL_112 | 1/A2/3364:3366, 1/A2/3397:3398 | No text annotation | ||
| IL_9QQL_113 | 1/A2/3366:3370, 1/A2/3395:3397 | No text annotation | ||
| IL_9QQL_114 | 1/A2/3371:3377, 1/A2/3388:3394 | No text annotation | ||
| IL_9QQL_115 | 1/A2/3436:3437, 1/A2/3467:3470 | No text annotation | ||
| IL_9QQL_116 | 1/A2/3437:3448, 1/A2/3464:3467 | No text annotation | ||
| IL_9QQL_117 | 1/A2/3551:3554, 1/A2/4215:4217 | No text annotation | ||
| IL_9QQL_118 | 1/A2/3556:3558, 1/A2/4210:4213 | No text annotation | ||
| IL_9QQL_119 | 1/A2/3569:3571, 1/A2/4040:4041 | No text annotation | ||
| IL_9QQL_120 | 1/A2/3572:3573, 1/A2/4036:4039 | No text annotation | ||
| IL_9QQL_121 | 1/A2/3583:3585, 1/A2/3833:3836 | No text annotation | ||
| IL_9QQL_125 | 1/A2/3732:3738, 1/A2/3813:3816 | No text annotation | ||
| IL_9QQL_128 | 1/A2/3843:3844, 1/A2/3854:3856 | No text annotation | ||
| IL_9QQL_129 | 1/A2/3895:3897, 1/A2/3915:3919 | No text annotation | ||
| IL_9QQL_130 | 1/A2/3943:3945, 1/A2/3969:3970 | No text annotation | ||
| IL_9QQL_131 | 1/A2/3947:3950, 1/A2/3964:3967 | No text annotation | ||
| IL_9QQL_132 | 1/A2/3999:4002, 1/A2/4016:4017 | No text annotation | ||
| IL_9QQL_133 | 1/A2/4052:4053, 1/A2/4094:4096 | No text annotation | ||
| IL_9QQL_134 | 1/A2/4053:4055, 1/A2/4092:4094 | No text annotation | ||
| IL_9QQL_135 | 1/A2/4055:4057, 1/A2/4091:4092 | No text annotation | ||
| IL_9QQL_136 | 1/A2/4057:4059, 1/A2/4087:4091 | No text annotation | ||
| IL_9QQL_137 | 1/A2/4064:4068, 1/A2/4078:4082 | No text annotation | ||
| IL_9QQL_138 | 1/A2/4105:4106, 1/A2/4178:4180 | No text annotation | ||
| IL_9QQL_139 | 1/A2/4108:4110, 1/A2/4172:4176 | No text annotation | ||
| IL_9QQL_140 | 1/A2/4110:4111, 1/A2/4169:4172 | No text annotation | ||
| IL_9QQL_141 | 1/A2/4118:4120, 1/A2/4141:4143 | No text annotation | ||
| IL_9QQL_142 | 1/A2/4118:4122, 1/A2/4137:4143 | No text annotation | ||
| IL_9QQL_143 | 1/A2/4120:4122, 1/A2/4137:4141 | No text annotation | ||
| IL_9QQL_144 | 1/A2/4147:4149, 1/A2/4155:4157 | No text annotation | ||
| IL_9QQL_145 | 1/A2/4189:4190, 1/A2/4199:4201 | No text annotation | ||
| IL_9QQL_146 | 1/A2/4232:4234, 1/A2/4373:4375 | No text annotation | ||
| IL_9QQL_147 | 1/A2/4234:4237, 1/A2/4369:4373 | No text annotation | ||
| IL_9QQL_148 | 1/A2/4242:4245, 1/A2/4269:4272 | No text annotation | ||
| IL_9QQL_149 | 1/A2/4248:4255, 1/A2/4260:4266 | No text annotation | ||
| IL_9QQL_150 | 1/A2/4276:4281, 1/A2/4321:4325 | No text annotation | ||
| IL_9QQL_151 | 1/A2/4284:4289, 1/A2/4314:4318 | No text annotation | ||
| IL_9QQL_152 | 1/A2/4290:4292, 1/A2/4311:4313 | No text annotation | ||
| IL_9QQL_153 | 1/A2/4293:4294, 1/A2/4307:4310 | No text annotation | ||
| IL_9QQL_154 | 1/A2/4332:4337, 1/A2/4357:4362 | No text annotation | ||
| IL_9QQL_156 | 1/A2/4395:4398, 1/A2/4600:4603 | No text annotation | ||
| IL_9QQL_157 | 1/A2/4399:4401, 1/A2/4597:4599 | No text annotation | ||
| IL_9QQL_158 | 1/A2/4401:4403, 1/A2/4594:4597 | No text annotation | ||
| IL_9QQL_159 | 1/A2/4408:4417, 1/A2/4514:4522 | No text annotation | ||
| IL_9QQL_160 | 1/A2/4422:4425, 1/A2/4508:4509 | No text annotation | ||
| IL_9QQL_164 | 1/A2/4530:4533, 1/A2/4576:4579 | No text annotation | ||
| IL_9QQL_165 | 1/A2/4536:4541, 1/A2/4569:4573 | No text annotation | ||
| IL_9QQL_167 | 1/A2/4618:4621, 1/A2/4629:4632 | No text annotation | ||
| IL_9QQL_168 | 1/A2/4638:4640, 1/A2/4703:4705 | No text annotation | ||
| IL_9QQL_169 | 1/A2/4642:4643, 1/A2/4699:4701 | No text annotation | ||
| IL_9QQL_170 | 1/A2/4646:4648, 1/A2/4691:4696 | No text annotation | ||
| IL_9QQL_171 | 1/A2/4649:4655, 1/A2/4685:4690 | No text annotation | ||
| IL_9QQL_172 | 1/A2/4658:4660, 1/A2/4681:4682 | No text annotation | ||
| IL_9QQL_173 | 1/A2/4660:4663, 1/A2/4678:4681 | No text annotation | ||
| IL_9QQL_174 | 1/B2/15:16, 1/B2/62:64 | No text annotation | geometric IL_8QYX_165 IL_05642.5 | |
| IL_9QQL_175 | 1/B2/21:27, 1/B2/52:57 | No text annotation | geometric IL_8QYX_166 IL_41504.2 | |
| IL_9QQL_176 | 1/B2/28:29, 1/B2/48:51 | Major groove minor groove platform; mini C-loop | homologous IL_4V9F_103 IL_73108.4 | |
| IL_9QQL_177 | 1/B2/32:36, 1/B2/41:45 | Symmetric double minor groove platform | homologous IL_4V9F_104 IL_58103.14 | |
| IL_9QQL_178 | 1/B2/71:78, 1/B2/98:104 | 8x7 Sarcin-Ricin; G-bulge | geometric IL_8QYX_169 IL_62879.1 | |
| IL_9QQL_179 | 1/B2/79:81, 1/B2/95:97 | Isolated non-canonical cWW pair | homologous IL_7A0S_107 IL_01334.1 | |
| IL_9QQL_180 | 1/B2/82:85, 1/B2/92:94 | No text annotation | geometric IL_8QYX_171 IL_01003.6 | |
| IL_9QQL_181 | 1/C2/64:66, 1/C2/92:95 | No text annotation | ||
| IL_9QQL_182 | 1/m2/23:25, 1/m2/651:653 | No text annotation | ||
| IL_9QQL_183 | 1/m2/34:36, 1/m2/521:523 | No text annotation | ||
| IL_9QQL_184 | 1/m2/37:40, 1/m2/516:520 | No text annotation | ||
| IL_9QQL_185 | 1/m2/41:47, 1/m2/481:483 | No text annotation | ||
| IL_9QQL_186 | 1/m2/49:51, 1/m2/478:479 | No text annotation | ||
| IL_9QQL_187 | 1/m2/57:62, 1/m2/86:88 | No text annotation | ||
| IL_9QQL_188 | 1/m2/63:68, 1/m2/81:85 | No text annotation | ||
| IL_9QQL_189 | 1/m2/108:110, 1/m2/353:355 | No text annotation | ||
| IL_9QQL_190 | 1/m2/110:112, 1/m2/351:353 | No text annotation | ||
| IL_9QQL_191 | 1/m2/112:115, 1/m2/350:351 | No text annotation | ||
| IL_9QQL_192 | 1/m2/116:121, 1/m2/345:349 | No text annotation | ||
| IL_9QQL_193 | 1/m2/152:154, 1/m2/164:166 | No text annotation | ||
| IL_9QQL_194 | 1/m2/188:189, 1/m2/211:213 | No text annotation | ||
| IL_9QQL_195 | 1/m2/189:192, 1/m2/209:211 | No text annotation | ||
| IL_9QQL_196 | 1/m2/218:221, 1/m2/304:311 | No text annotation | ||
| IL_9QQL_197 | 1/m2/225:290, 1/m2/297:300 | No text annotation | ||
| IL_9QQL_198 | 1/m2/319:321, 1/m2/334:335 | No text annotation | ||
| IL_9QQL_199 | 1/m2/361:366, 1/m2/398:405 | No text annotation | ||
| IL_9QQL_200 | 1/m2/368:375, 1/m2/393:396 | No text annotation | ||
| IL_9QQL_201 | 1/m2/413:415, 1/m2/426:431 | No text annotation | ||
| IL_9QQL_202 | 1/m2/439:441, 1/m2/456:458 | No text annotation | ||
| IL_9QQL_203 | 1/m2/461:463, 1/m2/470:472 | No text annotation | ||
| IL_9QQL_204 | 1/m2/489:491, 1/m2/513:514 | No text annotation | ||
| IL_9QQL_205 | 1/m2/493:497, 1/m2/510:511 | No text annotation | ||
| IL_9QQL_206 | 1/m2/497:498, 1/m2/508:510 | No text annotation | ||
| IL_9QQL_208 | 1/m2/565:567, 1/m2/587:594 | No text annotation | ||
| IL_9QQL_209 | 1/m2/568:571, 1/m2/583:586 | No text annotation | ||
| IL_9QQL_210 | 1/m2/601:608, 1/m2/638:639 | No text annotation | ||
| IL_9QQL_211 | 1/m2/608:610, 1/m2/637:638 | No text annotation | ||
| IL_9QQL_212 | 1/m2/613:619, 1/m2/626:634 | No text annotation | ||
| IL_9QQL_213 | 1/m2/665:667, 1/m2/1164:1166 | No text annotation | ||
| IL_9QQL_214 | 1/m2/667:673, 1/m2/1163:1164 | No text annotation | ||
| IL_9QQL_215 | 1/m2/675:677, 1/m2/1032:1034 | No text annotation | ||
| IL_9QQL_216 | 1/m2/678:682, 1/m2/1027:1031 | No text annotation | ||
| IL_9QQL_217 | 1/m2/804:805, 1/m2/862:865 | No text annotation | ||
| IL_9QQL_218 | 1/m2/807:809, 1/m2/858:860 | No text annotation | ||
| IL_9QQL_219 | 1/m2/809:817, 1/m2/851:858 | No text annotation | ||
| IL_9QQL_220 | 1/m2/876:878, 1/m2/912:914 | No text annotation | ||
| IL_9QQL_222 | 1/m2/927:929, 1/m2/1016:1019 | No text annotation | ||
| IL_9QQL_223 | 1/m2/930:933, 1/m2/1012:1015 | No text annotation | ||
| IL_9QQL_224 | 1/m2/933:937, 1/m2/1009:1012 | No text annotation | ||
| IL_9QQL_225 | 1/m2/944:947, 1/m2/983:986 | No text annotation | ||
| IL_9QQL_226 | 1/m2/954:958, 1/m2/969:976 | No text annotation | ||
| IL_9QQL_227 | 1/m2/1044:1049, 1/m2/1073:1075 | No text annotation | ||
| IL_9QQL_228 | 1/m2/1049:1053, 1/m2/1069:1073 | No text annotation | ||
| IL_9QQL_229 | 1/m2/1093:1095, 1/m2/1154:1160 | No text annotation | ||
| IL_9QQL_230 | 1/m2/1100:1103, 1/m2/1133:1136 | No text annotation | ||
| IL_9QQL_231 | 1/m2/1103:1105, 1/m2/1131:1133 | No text annotation | ||
| IL_9QQL_232 | 1/m2/1110:1112, 1/m2/1125:1126 | No text annotation | ||
| IL_9QQL_233 | 1/m2/1170:1177, 1/m2/1188:1193 | No text annotation | ||
| IL_9QQL_234 | 1/m2/1205:1206, 1/m2/1696:1698 | No text annotation | ||
| IL_9QQL_235 | 1/m2/1208:1210, 1/m2/1693:1694 | No text annotation | ||
| IL_9QQL_236 | 1/m2/1216:1219, 1/m2/1683:1687 | No text annotation | ||
| IL_9QQL_237 | 1/m2/1232:1234, 1/m2/1528:1530 | No text annotation | ||
| IL_9QQL_238 | 1/m2/1237:1238, 1/m2/1523:1525 | No text annotation | ||
| IL_9QQL_242 | 1/m2/1327:1329, 1/m2/1504:1505 | No text annotation | ||
| IL_9QQL_243 | 1/m2/1331:1335, 1/m2/1500:1502 | No text annotation | ||
| IL_9QQL_244 | 1/m2/1331:1337, 1/m2/1494:1502 | No text annotation | ||
| IL_9QQL_245 | 1/m2/1335:1337, 1/m2/1494:1500 | No text annotation | ||
| IL_9QQL_246 | 1/m2/1339:1340, 1/m2/1490:1492 | No text annotation | ||
| IL_9QQL_247 | 1/m2/1349:1351, 1/m2/1382:1384 | No text annotation | ||
| IL_9QQL_248 | 1/m2/1365:1367, 1/m2/1376:1377 | No text annotation | ||
| IL_9QQL_249 | 1/m2/1397:1401, 1/m2/1449:1452 | No text annotation | ||
| IL_9QQL_250 | 1/m2/1404:1407, 1/m2/1443:1446 | No text annotation | ||
| IL_9QQL_251 | 1/m2/1414:1415, 1/m2/1429:1431 | No text annotation | ||
| IL_9QQL_253 | 1/m2/1539:1541, 1/m2/1596:1598 | No text annotation | ||
| IL_9QQL_254 | 1/m2/1543:1552, 1/m2/1584:1594 | No text annotation | ||
| IL_9QQL_255 | 1/m2/1552:1560, 1/m2/1579:1584 | No text annotation | ||
| IL_9QQL_256 | 1/m2/1606:1612, 1/m2/1631:1637 | No text annotation | ||
| IL_9QQL_257 | 1/m2/1702:1704, 1/m2/1835:1838 | No text annotation | ||
| IL_9QQL_258 | 1/m2/1704:1707, 1/m2/1831:1835 | No text annotation | ||
| IL_9QQL_259 | 1/m2/1708:1710, 1/m2/1828:1830 | No text annotation | ||
| IL_9QQL_260 | 1/m2/1710:1713, 1/m2/1824:1828 | No text annotation | ||
| IL_9QQL_261 | 1/m2/1716:1718, 1/m2/1819:1821 | No text annotation | ||
| IL_9QQL_262 | 1/m2/1719:1722, 1/m2/1815:1818 | No text annotation | ||
| IL_9QQL_263 | 1/m2/1722:1724, 1/m2/1814:1815 | No text annotation | ||
| IL_9QQL_264 | 1/m2/1731:1733, 1/m2/1805:1807 | No text annotation | ||
| IL_9QQL_265 | 1/m2/1735:1738, 1/m2/1800:1803 | No text annotation | ||
| IL_9QQL_266 | 1/m2/1741:1743, 1/m2/1795:1797 | No text annotation | ||
| IL_9QQL_267 | 1/m2/1744:1748, 1/m2/1790:1794 | No text annotation |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_9QQL_010 | No text annotation | ||
| IL_9QQL_028 | No text annotation | ||
| IL_9QQL_033 | No text annotation | ||
| IL_9QQL_036 | No text annotation | ||
| IL_9QQL_037 | No text annotation | ||
| IL_9QQL_039 | No text annotation | ||
| IL_9QQL_040 | No text annotation | ||
| IL_9QQL_041 | No text annotation | ||
| IL_9QQL_043 | No text annotation | ||
| IL_9QQL_044 | No text annotation | ||
| IL_9QQL_070 | No text annotation | ||
| IL_9QQL_073 | No text annotation | ||
| IL_9QQL_081 | No text annotation | ||
| IL_9QQL_099 | No text annotation | ||
| IL_9QQL_122 | No text annotation | ||
| IL_9QQL_123 | No text annotation | ||
| IL_9QQL_124 | No text annotation | ||
| IL_9QQL_126 | No text annotation | ||
| IL_9QQL_127 | No text annotation | ||
| IL_9QQL_155 | No text annotation | ||
| IL_9QQL_161 | No text annotation | ||
| IL_9QQL_162 | No text annotation | ||
| IL_9QQL_163 | No text annotation | ||
| IL_9QQL_166 | No text annotation | ||
| IL_9QQL_207 | No text annotation | ||
| IL_9QQL_221 | No text annotation | ||
| IL_9QQL_239 | No text annotation | ||
| IL_9QQL_240 | No text annotation | ||
| IL_9QQL_241 | No text annotation | ||
| IL_9QQL_252 | No text annotation |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J3_9QQL_001 | 1/A2/112:116, 1/A2/155:160, 1/A2/275:278 | No text annotation | ||
| J3_9QQL_002 | 1/A2/196:199, 1/A2/215:228, 1/A2/240:244 | No text annotation | ||
| J3_9QQL_003 | 1/A2/351:367, 1/A2/374:379, 1/C2/21:24 | No text annotation | ||
| J3_9QQL_004 | 1/A2/380:387, 1/A2/414:415, 1/C2/19:20 | No text annotation | ||
| J3_9QQL_005 | 1/A2/380:390, 1/A2/401:415, 1/C2/19:20 | No text annotation | ||
| J3_9QQL_006 | 1/A2/451:455, 1/A2/708:712, 1/A2/1106:1110 | No text annotation | ||
| J3_9QQL_007 | 1/A2/719:720, 1/A2/853:876, 1/A2/1092:1098 | No text annotation | ||
| J3_9QQL_008 | 1/A2/1344:1350, 1/A2/1435:1437, 1/A2/1453:1456 | No text annotation | ||
| J3_9QQL_009 | 1/A2/1359:1361, 1/A2/1393:1397, 1/A2/1422:1425 | No text annotation | ||
| J3_9QQL_010 | 1/A2/1528:1529, 1/A2/1604:1608, 1/A2/1634:1639 | No text annotation | ||
| J3_9QQL_011 | 1/A2/1889:1912, 1/A2/2005:2012, 1/A2/2016:2025 | No text annotation | ||
| J3_9QQL_012 | 1/A2/2148:2154, 1/A2/2560:2562, 1/A2/2574:2577 | No text annotation | ||
| J3_9QQL_013 | 1/A2/2157:2160, 1/A2/2540:2546, 1/A2/2555:2557 | No text annotation | ||
| J3_9QQL_014 | 1/A2/2195:2200, 1/A2/2270:2274, 1/A2/2291:2292 | No text annotation | ||
| J3_9QQL_015 | 1/A2/2206:2211, 1/A2/2220:2231, 1/A2/2256:2263 | No text annotation | ||
| J3_9QQL_016 | 1/A2/2306:2310, 1/A2/2327:2330, 1/A2/2512:2522 | No text annotation | ||
| J3_9QQL_017 | 1/A2/2330:2332, 1/A2/2339:2344, 1/A2/2511:2512 | No text annotation | ||
| J3_9QQL_018 | 1/A2/2353:2357, 1/A2/2492:2493, 1/A2/2497:2502 | No text annotation | ||
| J3_9QQL_019 | 1/A2/3352:3354, 1/A2/3408:3436, 1/A2/3470:3475 | No text annotation | ||
| J3_9QQL_020 | 1/A2/3593:3595, 1/A2/3724:3728, 1/A2/3820:3825 | No text annotation | ||
| J3_9QQL_021 | 1/A2/3741:3745, 1/A2/3764:3779, 1/A2/3807:3810 | No text annotation | ||
| J3_9QQL_022 | 1/A2/3880:3882, 1/A2/3983:3994, 1/A2/4022:4027 | No text annotation | ||
| J3_9QQL_023 | 1/A2/3893:3895, 1/A2/3919:3921, 1/A2/3930:3935 | No text annotation | ||
| J3_9QQL_024 | 1/A2/4115:4118, 1/A2/4143:4145, 1/A2/4159:4165 | No text annotation | ||
| J3_9QQL_025 | 1/A2/4403:4406, 1/A2/4524:4528, 1/A2/4581:4594 | No text annotation | ||
| J3_9QQL_026 | 1/A2/4616:4618, 1/A2/4632:4637, 1/A2/4706:4709 | No text annotation | ||
| J3_9QQL_027 | 1/B2/9:14, 1/B2/65:66, 1/B2/109:110 | No text annotation | geometric J3_8QYX_024 J3_26985.3 | |
| J3_9QQL_028 | 1/C2/44:45, 1/C2/58:64, 1/C2/95:99 | No text annotation | ||
| J3_9QQL_029 | 1/m2/40:41, 1/m2/483:489, 1/m2/514:516 | No text annotation | ||
| J3_9QQL_030 | 1/m2/40:47, 1/m2/481:489, 1/m2/514:516 | No text annotation | ||
| J3_9QQL_031 | 1/m2/684:687, 1/m2/919:925, 1/m2/1021:1025 | No text annotation | ||
| J3_9QQL_032 | 1/m2/687:802, 1/m2/867:876, 1/m2/914:919 | No text annotation | ||
| J3_9QQL_033 | 1/m2/818:821, 1/m2/831:833, 1/m2/845:850 | No text annotation | ||
| J3_9QQL_034 | 1/m2/940:943, 1/m2/987:995, 1/m2/1002:1006 | No text annotation | ||
| J3_9QQL_035 | 1/m2/1096:1098, 1/m2/1138:1142, 1/m2/1149:1153 | No text annotation | ||
| J3_9QQL_036 | 1/m2/1220:1223, 1/m2/1647:1653, 1/m2/1675:1682 | No text annotation | ||
| J3_9QQL_037 | 1/m2/1227:1230, 1/m2/1532:1534, 1/m2/1640:1643 | No text annotation | ||
| J3_9QQL_038 | 1/m2/1239:1246, 1/m2/1257:1268, 1/m2/1518:1522 | No text annotation | ||
| J3_9QQL_039 | 1/m2/1274:1279, 1/m2/1322:1326, 1/m2/1506:1512 | No text annotation | ||
| J3_9QQL_040 | 1/m2/1342:1347, 1/m2/1386:1391, 1/m2/1483:1488 | No text annotation | ||
| J3_9QQL_041 | 1/m2/1352:1353, 1/m2/1362:1365, 1/m2/1377:1381 | No text annotation | ||
| J3_9QQL_042 | 1/m2/1393:1397, 1/m2/1452:1458, 1/m2/1472:1481 | No text annotation | ||
| J3_9QQL_043 | 1/m2/1534:1538, 1/m2/1599:1606, 1/m2/1637:1640 | No text annotation | ||
| J4_9QQL_001 | 1/A2/111:112, 1/A2/278:283, 1/A2/304:310, 1/A2/327:330 | No text annotation | ||
| J4_9QQL_002 | 1/A2/196:199, 1/A2/215:222, 1/A2/226:228, 1/A2/240:244 | No text annotation | ||
| J4_9QQL_003 | 1/A2/881:883, 1/A2/925:929, 1/A2/1062:1068, 1/A2/1081:1087 | No text annotation | ||
| J4_9QQL_004 | 1/A2/2120:2126, 1/A2/2144:2146, 1/A2/2579:2584, 1/A2/3512:3513 | No text annotation | ||
| J4_9QQL_005 | 1/A2/2161:2165, 1/A2/2189:2194, 1/A2/2293:2294, 1/A2/2532:2539 | No text annotation | ||
| J4_9QQL_006 | 1/A2/2373:2374, 1/A2/2392:2397, 1/A2/2447:2453, 1/A2/2473:2474 | No text annotation | ||
| J4_9QQL_007 | 1/A2/3290:3294, 1/A2/3306:3310, 1/A2/3346:3350, 1/A2/3477:3482 | No text annotation | ||
| J4_9QQL_008 | 1/A2/3883:3887, 1/A2/3941:3943, 1/A2/3970:3971, 1/A2/3980:3982 | No text annotation | ||
| J4_9QQL_009 | 1/A2/4239:4242, 1/A2/4272:4273, 1/A2/4328:4330, 1/A2/4364:4367 | No text annotation | ||
| J4_9QQL_010 | 1/Bv/7:10, 1/Bv/25:27, 1/Bv/43:49, 1/Bv/65:66 | tRNA junction | homologous J4_6UGG_002 J4_95067.2 | |
| J4_9QQL_011 | 1/m2/98:106, 1/m2/357:359, 1/m2/407:411, 1/m2/433:434 | No text annotation | ||
| J4_9QQL_012 | 1/m2/673:675, 1/m2/1034:1039, 1/m2/1080:1091, 1/m2/1162:1163 | No text annotation | ||
| J5_9QQL_001 | 1/A2/19:21, 1/C2/35:42, 1/C2/101:106, 1/C2/113:114, 1/C2/136:138 | No text annotation | ||
| J5_9QQL_002 | 1/A2/1149:1154, 1/A2/1329:1332, 1/A2/1471:1474, 1/A2/2043:2045, 1/A2/2100:2106 | No text annotation | ||
| J5_9QQL_003 | 1/A2/2610:2618, 1/A2/2642:2643, 1/A2/3269:3270, 1/A2/3274:3282, 1/A2/3491:3493 | No text annotation | ||
| J5_9QQL_004 | 1/A2/3559:3566, 1/A2/4044:4052, 1/A2/4096:4105, 1/A2/4180:4186, 1/A2/4204:4209 | No text annotation | ||
| J5_9QQL_005 | 1/A2/3576:3579, 1/A2/3840:3843, 1/A2/3856:3857, 1/A2/3879:3880, 1/A2/4027:4033 | No text annotation | ||
| J5_9QQL_006 | 1/m2/30:34, 1/m2/523:529, 1/m2/560:565, 1/m2/594:597, 1/m2/643:646 | No text annotation | ||
| J5_9QQL_007 | 1/m2/30:34, 1/m2/523:529, 1/m2/560:567, 1/m2/587:597, 1/m2/643:646 | No text annotation | ||
| J5_9QQL_008 | 1/m2/53:56, 1/m2/89:96, 1/m2/436:438, 1/m2/459:461, 1/m2/472:476 | No text annotation | ||
| J5_9QQL_009 | 1/m2/123:151, 1/m2/167:185, 1/m2/216:217, 1/m2/312:316, 1/m2/338:343 | No text annotation | ||
| J6_9QQL_001 | 1/A2/21:26, 1/A2/57:67, 1/A2/74:78, 1/A2/105:109, 1/A2/332:339, 1/C2/33:35 | No text annotation | ||
| J6_9QQL_002 | 1/A2/1166:1169, 1/A2/1198:1202, 1/A2/1209:1213, 1/A2/1231:1234, 1/A2/1277:1279, 1/A2/1312:1317 | No text annotation | ||
| J6_9QQL_003 | 1/A2/3576:3579, 1/A2/3840:3843, 1/A2/3856:3857, 1/A2/3879:3882, 1/A2/3983:3994, 1/A2/4022:4033 | No text annotation | ||
| J7_9QQL_001 | 1/A2/1479:1484, 1/A2/1497:1498, 1/A2/1654:1657, 1/A2/1681:1686, 1/A2/1697:1701, 1/A2/1879:1880, 1/A2/2033:2038 | No text annotation |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| J4_9QQL_013 | tRNA junction |
Coloring options: