HL_9QQP_074
3D structure
- PDB id
- 9QQP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mouse Ribosome rotated-2 PRE state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- GAUUGAAAAUC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9QQP_074 not in the Motif Atlas
- Homologous match to HL_5IB8_208
- Geometric discrepancy: 0.4688
- The information below is about HL_5IB8_208
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_14063.2
- Basepair signature
- cWW-F-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 6
Unit IDs
9QQP|1|Bv|G|30
9QQP|1|Bv|A|31
9QQP|1|Bv|U|32
9QQP|1|Bv|U|33
9QQP|1|Bv|G|34
9QQP|1|Bv|A|35
9QQP|1|Bv|A|36
9QQP|1|Bv|A|37
9QQP|1|Bv|A|38
9QQP|1|Bv|U|39
9QQP|1|Bv|C|40
Current chains
- Chain Bv
- transfer RNA
Nearby chains
- Chain A2
- Large subunit ribosomal RNA; LSU rRNA
- Chain Bx
- messenger RNA
- Chain E3
- Small ribosomal subunit protein uS12
- Chain m2
- Small subunit ribosomal RNA; SSU rRNA
- Chain x2
- Small ribosomal subunit protein uS19
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