HL_9QQP_114
3D structure
- PDB id
- 9QQP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mouse Ribosome rotated-2 PRE state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- GCCCAUAAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9QQP_114 not in the Motif Atlas
- Homologous match to HL_6UFG_007
- Geometric discrepancy: 0.1019
- The information below is about HL_6UFG_007
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_81376.4
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 44
Unit IDs
9QQP|1|n2|G|30
9QQP|1|n2|C|31
9QQP|1|n2|C|32
9QQP|1|n2|C|33
9QQP|1|n2|A|34
9QQP|1|n2|U|35
9QQP|1|n2|A|36
9QQP|1|n2|A|37
9QQP|1|n2|C|38
Current chains
- Chain n2
- transfer RNA
Nearby chains
- Chain Bx
- messenger RNA
- Chain m2
- Small subunit ribosomal RNA; SSU rRNA
- Chain x2
- Small ribosomal subunit protein uS19
- Chain y2
- Small ribosomal subunit protein uS9
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