HL_9QSA_007

3D structure

PDB id

9QSA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse Ribosome rotated-1 PRE state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GUGUGAGGC

Length

9 nucleotides

Bulged bases

9QSA|1|A2|G|232, 9QSA|1|A2|U|233, 9QSA|1|A2|G|234

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QSA|1|A2|G|230
9QSA|1|A2|U|231
9QSA|1|A2|G|232
9QSA|1|A2|U|233
9QSA|1|A2|G|234
9QSA|1|A2|A|235
9QSA|1|A2|G|236
9QSA|1|A2|G|237
9QSA|1|A2|C|238

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain C2

5.8S ribosomal RNA; 5.8S rRNA

Chain F2

Large ribosomal subunit protein uL4

Chain S2

Large ribosomal subunit protein uL24