9QSA Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
No loops found
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_9QSA_001 | No text annotation | ||
| HL_9QSA_002 | No text annotation | ||
| HL_9QSA_003 | No text annotation | ||
| HL_9QSA_004 | No text annotation | ||
| HL_9QSA_005 | No text annotation | ||
| HL_9QSA_006 | No text annotation | ||
| HL_9QSA_007 | No text annotation | ||
| HL_9QSA_008 | No text annotation | ||
| HL_9QSA_009 | No text annotation | ||
| HL_9QSA_010 | No text annotation | ||
| HL_9QSA_011 | No text annotation | ||
| HL_9QSA_012 | No text annotation | ||
| HL_9QSA_013 | No text annotation | ||
| HL_9QSA_014 | No text annotation | ||
| HL_9QSA_015 | No text annotation | ||
| HL_9QSA_016 | No text annotation | ||
| HL_9QSA_017 | No text annotation | ||
| HL_9QSA_018 | No text annotation | ||
| HL_9QSA_019 | No text annotation | ||
| HL_9QSA_020 | No text annotation | ||
| HL_9QSA_021 | No text annotation | ||
| HL_9QSA_022 | No text annotation | ||
| HL_9QSA_023 | No text annotation | ||
| HL_9QSA_024 | No text annotation | ||
| HL_9QSA_025 | No text annotation | ||
| HL_9QSA_026 | No text annotation | ||
| HL_9QSA_027 | No text annotation | ||
| HL_9QSA_028 | No text annotation | ||
| HL_9QSA_029 | No text annotation | ||
| HL_9QSA_030 | No text annotation | ||
| HL_9QSA_031 | No text annotation | ||
| HL_9QSA_032 | No text annotation | ||
| HL_9QSA_033 | No text annotation | ||
| HL_9QSA_034 | No text annotation | ||
| HL_9QSA_035 | No text annotation | ||
| HL_9QSA_036 | No text annotation | ||
| HL_9QSA_037 | No text annotation | ||
| HL_9QSA_038 | No text annotation | ||
| HL_9QSA_039 | No text annotation | ||
| HL_9QSA_040 | No text annotation | ||
| HL_9QSA_041 | No text annotation | ||
| HL_9QSA_042 | No text annotation | ||
| HL_9QSA_043 | No text annotation | ||
| HL_9QSA_044 | No text annotation | ||
| HL_9QSA_045 | No text annotation | ||
| HL_9QSA_046 | No text annotation | ||
| HL_9QSA_047 | No text annotation | ||
| HL_9QSA_048 | No text annotation | ||
| HL_9QSA_049 | No text annotation | ||
| HL_9QSA_050 | No text annotation | ||
| HL_9QSA_051 | No text annotation | ||
| HL_9QSA_052 | No text annotation | ||
| HL_9QSA_053 | No text annotation | ||
| HL_9QSA_054 | No text annotation | ||
| HL_9QSA_055 | No text annotation | ||
| HL_9QSA_056 | No text annotation | ||
| HL_9QSA_057 | No text annotation | ||
| HL_9QSA_058 | No text annotation | ||
| HL_9QSA_059 | No text annotation | ||
| HL_9QSA_060 | No text annotation | ||
| HL_9QSA_061 | No text annotation | ||
| HL_9QSA_062 | No text annotation | ||
| HL_9QSA_063 | No text annotation | ||
| HL_9QSA_064 | No text annotation | ||
| HL_9QSA_065 | No text annotation | ||
| HL_9QSA_066 | No text annotation | ||
| HL_9QSA_067 | No text annotation | ||
| HL_9QSA_068 | No text annotation | ||
| HL_9QSA_069 | No text annotation | ||
| HL_9QSA_070 | No text annotation | ||
| HL_9QSA_071 | No text annotation | ||
| HL_9QSA_072 | No text annotation | ||
| HL_9QSA_073 | GNRA | ||
| HL_9QSA_074 | tRNA anticodon loop | ||
| HL_9QSA_075 | No text annotation | ||
| HL_9QSA_076 | No text annotation | ||
| HL_9QSA_077 | No text annotation | ||
| HL_9QSA_078 | No text annotation | ||
| HL_9QSA_079 | No text annotation | ||
| HL_9QSA_080 | No text annotation | ||
| HL_9QSA_081 | No text annotation | ||
| HL_9QSA_082 | No text annotation | ||
| HL_9QSA_083 | No text annotation | ||
| HL_9QSA_084 | No text annotation | ||
| HL_9QSA_085 | No text annotation | ||
| HL_9QSA_086 | No text annotation | ||
| HL_9QSA_087 | No text annotation | ||
| HL_9QSA_088 | No text annotation | ||
| HL_9QSA_089 | No text annotation | ||
| HL_9QSA_090 | No text annotation | ||
| HL_9QSA_091 | No text annotation | ||
| HL_9QSA_092 | No text annotation | ||
| HL_9QSA_093 | No text annotation | ||
| HL_9QSA_094 | No text annotation | ||
| HL_9QSA_095 | No text annotation | ||
| HL_9QSA_096 | No text annotation | ||
| HL_9QSA_097 | No text annotation | ||
| HL_9QSA_098 | No text annotation | ||
| HL_9QSA_099 | No text annotation | ||
| HL_9QSA_100 | No text annotation | ||
| HL_9QSA_101 | No text annotation | ||
| HL_9QSA_102 | No text annotation | ||
| HL_9QSA_103 | No text annotation | ||
| HL_9QSA_104 | No text annotation | ||
| HL_9QSA_105 | No text annotation | ||
| HL_9QSA_106 | No text annotation | ||
| HL_9QSA_107 | No text annotation | ||
| HL_9QSA_108 | No text annotation | ||
| HL_9QSA_109 | No text annotation | ||
| HL_9QSA_110 | No text annotation | ||
| HL_9QSA_111 | No text annotation | ||
| HL_9QSA_112 | tRNA anticodon loop | ||
| HL_9QSA_113 | T-loop with 2 stacked bulged bases |
Valid loops
No loops found
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_9QSA_001 | No text annotation | ||
| IL_9QSA_002 | No text annotation | ||
| IL_9QSA_003 | No text annotation | ||
| IL_9QSA_004 | No text annotation | ||
| IL_9QSA_005 | No text annotation | ||
| IL_9QSA_006 | No text annotation | ||
| IL_9QSA_007 | No text annotation | ||
| IL_9QSA_008 | No text annotation | ||
| IL_9QSA_009 | No text annotation | ||
| IL_9QSA_010 | No text annotation | ||
| IL_9QSA_011 | No text annotation | ||
| IL_9QSA_012 | No text annotation | ||
| IL_9QSA_013 | No text annotation | ||
| IL_9QSA_014 | No text annotation | ||
| IL_9QSA_015 | No text annotation | ||
| IL_9QSA_016 | No text annotation | ||
| IL_9QSA_017 | No text annotation | ||
| IL_9QSA_018 | No text annotation | ||
| IL_9QSA_019 | No text annotation | ||
| IL_9QSA_020 | No text annotation | ||
| IL_9QSA_021 | No text annotation | ||
| IL_9QSA_022 | No text annotation | ||
| IL_9QSA_023 | No text annotation | ||
| IL_9QSA_024 | No text annotation | ||
| IL_9QSA_025 | No text annotation | ||
| IL_9QSA_026 | No text annotation | ||
| IL_9QSA_027 | No text annotation | ||
| IL_9QSA_028 | No text annotation | ||
| IL_9QSA_029 | No text annotation | ||
| IL_9QSA_030 | No text annotation | ||
| IL_9QSA_031 | No text annotation | ||
| IL_9QSA_032 | No text annotation | ||
| IL_9QSA_033 | No text annotation | ||
| IL_9QSA_034 | No text annotation | ||
| IL_9QSA_035 | No text annotation | ||
| IL_9QSA_036 | No text annotation | ||
| IL_9QSA_037 | No text annotation | ||
| IL_9QSA_038 | No text annotation | ||
| IL_9QSA_039 | No text annotation | ||
| IL_9QSA_040 | No text annotation | ||
| IL_9QSA_041 | No text annotation | ||
| IL_9QSA_042 | No text annotation | ||
| IL_9QSA_043 | No text annotation | ||
| IL_9QSA_044 | No text annotation | ||
| IL_9QSA_045 | No text annotation | ||
| IL_9QSA_046 | No text annotation | ||
| IL_9QSA_047 | No text annotation | ||
| IL_9QSA_048 | No text annotation | ||
| IL_9QSA_049 | No text annotation | ||
| IL_9QSA_050 | No text annotation | ||
| IL_9QSA_051 | No text annotation | ||
| IL_9QSA_052 | No text annotation | ||
| IL_9QSA_053 | No text annotation | ||
| IL_9QSA_054 | No text annotation | ||
| IL_9QSA_055 | No text annotation | ||
| IL_9QSA_056 | No text annotation | ||
| IL_9QSA_057 | No text annotation | ||
| IL_9QSA_058 | No text annotation | ||
| IL_9QSA_059 | No text annotation | ||
| IL_9QSA_060 | No text annotation | ||
| IL_9QSA_061 | No text annotation | ||
| IL_9QSA_062 | No text annotation | ||
| IL_9QSA_063 | No text annotation | ||
| IL_9QSA_064 | No text annotation | ||
| IL_9QSA_065 | No text annotation | ||
| IL_9QSA_066 | No text annotation | ||
| IL_9QSA_067 | No text annotation | ||
| IL_9QSA_068 | No text annotation | ||
| IL_9QSA_069 | No text annotation | ||
| IL_9QSA_070 | No text annotation | ||
| IL_9QSA_071 | No text annotation | ||
| IL_9QSA_072 | No text annotation | ||
| IL_9QSA_073 | No text annotation | ||
| IL_9QSA_074 | No text annotation | ||
| IL_9QSA_075 | No text annotation | ||
| IL_9QSA_076 | No text annotation | ||
| IL_9QSA_077 | No text annotation | ||
| IL_9QSA_078 | No text annotation | ||
| IL_9QSA_079 | No text annotation | ||
| IL_9QSA_080 | No text annotation | ||
| IL_9QSA_081 | No text annotation | ||
| IL_9QSA_082 | No text annotation | ||
| IL_9QSA_083 | No text annotation | ||
| IL_9QSA_084 | No text annotation | ||
| IL_9QSA_085 | No text annotation | ||
| IL_9QSA_086 | No text annotation | ||
| IL_9QSA_087 | No text annotation | ||
| IL_9QSA_088 | No text annotation | ||
| IL_9QSA_089 | No text annotation | ||
| IL_9QSA_090 | No text annotation | ||
| IL_9QSA_091 | No text annotation | ||
| IL_9QSA_092 | No text annotation | ||
| IL_9QSA_093 | No text annotation | ||
| IL_9QSA_094 | No text annotation | ||
| IL_9QSA_095 | No text annotation | ||
| IL_9QSA_096 | No text annotation | ||
| IL_9QSA_097 | No text annotation | ||
| IL_9QSA_098 | No text annotation | ||
| IL_9QSA_099 | No text annotation | ||
| IL_9QSA_100 | No text annotation | ||
| IL_9QSA_101 | No text annotation | ||
| IL_9QSA_102 | No text annotation | ||
| IL_9QSA_103 | No text annotation | ||
| IL_9QSA_104 | No text annotation | ||
| IL_9QSA_105 | No text annotation | ||
| IL_9QSA_106 | No text annotation | ||
| IL_9QSA_107 | No text annotation | ||
| IL_9QSA_108 | No text annotation | ||
| IL_9QSA_109 | No text annotation | ||
| IL_9QSA_110 | No text annotation | ||
| IL_9QSA_111 | No text annotation | ||
| IL_9QSA_112 | No text annotation | ||
| IL_9QSA_113 | No text annotation | ||
| IL_9QSA_114 | No text annotation | ||
| IL_9QSA_115 | No text annotation | ||
| IL_9QSA_116 | No text annotation | ||
| IL_9QSA_117 | No text annotation | ||
| IL_9QSA_118 | No text annotation | ||
| IL_9QSA_119 | No text annotation | ||
| IL_9QSA_120 | No text annotation | ||
| IL_9QSA_121 | No text annotation | ||
| IL_9QSA_122 | No text annotation | ||
| IL_9QSA_123 | No text annotation | ||
| IL_9QSA_124 | No text annotation | ||
| IL_9QSA_125 | No text annotation | ||
| IL_9QSA_126 | No text annotation | ||
| IL_9QSA_127 | No text annotation | ||
| IL_9QSA_128 | No text annotation | ||
| IL_9QSA_129 | No text annotation | ||
| IL_9QSA_130 | No text annotation | ||
| IL_9QSA_131 | No text annotation | ||
| IL_9QSA_132 | No text annotation | ||
| IL_9QSA_133 | No text annotation | ||
| IL_9QSA_134 | No text annotation | ||
| IL_9QSA_135 | No text annotation | ||
| IL_9QSA_136 | No text annotation | ||
| IL_9QSA_137 | No text annotation | ||
| IL_9QSA_138 | No text annotation | ||
| IL_9QSA_139 | No text annotation | ||
| IL_9QSA_140 | No text annotation | ||
| IL_9QSA_141 | No text annotation | ||
| IL_9QSA_142 | No text annotation | ||
| IL_9QSA_143 | No text annotation | ||
| IL_9QSA_144 | No text annotation | ||
| IL_9QSA_145 | No text annotation | ||
| IL_9QSA_146 | No text annotation | ||
| IL_9QSA_147 | No text annotation | ||
| IL_9QSA_148 | No text annotation | ||
| IL_9QSA_149 | No text annotation | ||
| IL_9QSA_150 | No text annotation | ||
| IL_9QSA_151 | No text annotation | ||
| IL_9QSA_152 | No text annotation | ||
| IL_9QSA_153 | No text annotation | ||
| IL_9QSA_154 | No text annotation | ||
| IL_9QSA_155 | No text annotation | ||
| IL_9QSA_156 | No text annotation | ||
| IL_9QSA_157 | No text annotation | ||
| IL_9QSA_158 | No text annotation | ||
| IL_9QSA_159 | No text annotation | ||
| IL_9QSA_160 | Major groove minor groove platform; mini C-loop | ||
| IL_9QSA_161 | Symmetric double minor groove platform | ||
| IL_9QSA_162 | 8x7 Sarcin-Ricin; G-bulge | ||
| IL_9QSA_163 | Isolated non-canonical cWW pair | ||
| IL_9QSA_164 | No text annotation | ||
| IL_9QSA_165 | Isolated non-canonical cWW pair | ||
| IL_9QSA_166 | No text annotation | ||
| IL_9QSA_167 | No text annotation | ||
| IL_9QSA_168 | No text annotation | ||
| IL_9QSA_169 | No text annotation | ||
| IL_9QSA_170 | No text annotation | ||
| IL_9QSA_171 | No text annotation | ||
| IL_9QSA_172 | No text annotation | ||
| IL_9QSA_173 | No text annotation | ||
| IL_9QSA_174 | No text annotation | ||
| IL_9QSA_175 | No text annotation | ||
| IL_9QSA_176 | No text annotation | ||
| IL_9QSA_177 | No text annotation | ||
| IL_9QSA_178 | No text annotation | ||
| IL_9QSA_179 | No text annotation | ||
| IL_9QSA_180 | No text annotation | ||
| IL_9QSA_181 | No text annotation | ||
| IL_9QSA_182 | No text annotation | ||
| IL_9QSA_183 | No text annotation | ||
| IL_9QSA_184 | No text annotation | ||
| IL_9QSA_185 | No text annotation | ||
| IL_9QSA_186 | No text annotation | ||
| IL_9QSA_187 | No text annotation | ||
| IL_9QSA_188 | No text annotation | ||
| IL_9QSA_189 | No text annotation | ||
| IL_9QSA_190 | No text annotation | ||
| IL_9QSA_191 | No text annotation | ||
| IL_9QSA_192 | No text annotation | ||
| IL_9QSA_193 | No text annotation | ||
| IL_9QSA_194 | No text annotation | ||
| IL_9QSA_195 | No text annotation | ||
| IL_9QSA_196 | No text annotation | ||
| IL_9QSA_197 | No text annotation | ||
| IL_9QSA_198 | No text annotation | ||
| IL_9QSA_199 | No text annotation | ||
| IL_9QSA_200 | No text annotation | ||
| IL_9QSA_201 | No text annotation | ||
| IL_9QSA_202 | No text annotation | ||
| IL_9QSA_203 | No text annotation | ||
| IL_9QSA_204 | No text annotation | ||
| IL_9QSA_205 | No text annotation | ||
| IL_9QSA_206 | No text annotation | ||
| IL_9QSA_207 | No text annotation | ||
| IL_9QSA_208 | No text annotation | ||
| IL_9QSA_209 | No text annotation | ||
| IL_9QSA_210 | No text annotation | ||
| IL_9QSA_211 | No text annotation | ||
| IL_9QSA_212 | No text annotation | ||
| IL_9QSA_213 | No text annotation | ||
| IL_9QSA_214 | No text annotation | ||
| IL_9QSA_215 | No text annotation | ||
| IL_9QSA_216 | No text annotation | ||
| IL_9QSA_217 | No text annotation | ||
| IL_9QSA_218 | No text annotation | ||
| IL_9QSA_219 | No text annotation | ||
| IL_9QSA_220 | No text annotation | ||
| IL_9QSA_221 | No text annotation | ||
| IL_9QSA_222 | No text annotation | ||
| IL_9QSA_223 | No text annotation | ||
| IL_9QSA_224 | No text annotation | ||
| IL_9QSA_225 | No text annotation | ||
| IL_9QSA_226 | No text annotation | ||
| IL_9QSA_227 | No text annotation | ||
| IL_9QSA_228 | No text annotation | ||
| IL_9QSA_229 | No text annotation | ||
| IL_9QSA_230 | No text annotation | ||
| IL_9QSA_231 | No text annotation | ||
| IL_9QSA_232 | No text annotation | ||
| IL_9QSA_233 | No text annotation | ||
| IL_9QSA_234 | No text annotation | ||
| IL_9QSA_235 | No text annotation | ||
| IL_9QSA_236 | No text annotation | ||
| IL_9QSA_237 | No text annotation | ||
| IL_9QSA_238 | No text annotation | ||
| IL_9QSA_239 | No text annotation | ||
| IL_9QSA_240 | No text annotation | ||
| IL_9QSA_241 | No text annotation | ||
| IL_9QSA_242 | No text annotation | ||
| IL_9QSA_243 | No text annotation | ||
| IL_9QSA_244 | No text annotation | ||
| IL_9QSA_245 | No text annotation | ||
| IL_9QSA_246 | No text annotation | ||
| IL_9QSA_247 | No text annotation | ||
| IL_9QSA_248 | No text annotation | ||
| IL_9QSA_249 | No text annotation | ||
| IL_9QSA_250 | No text annotation |
Valid loops
No loops found
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| J3_9QSA_001 | No text annotation | ||
| J3_9QSA_002 | No text annotation | ||
| J3_9QSA_003 | No text annotation | ||
| J3_9QSA_004 | No text annotation | ||
| J3_9QSA_005 | No text annotation | ||
| J3_9QSA_006 | No text annotation | ||
| J3_9QSA_007 | No text annotation | ||
| J3_9QSA_008 | No text annotation | ||
| J3_9QSA_009 | No text annotation | ||
| J3_9QSA_010 | No text annotation | ||
| J3_9QSA_011 | No text annotation | ||
| J3_9QSA_012 | No text annotation | ||
| J3_9QSA_013 | No text annotation | ||
| J3_9QSA_014 | No text annotation | ||
| J3_9QSA_015 | No text annotation | ||
| J3_9QSA_016 | No text annotation | ||
| J3_9QSA_017 | No text annotation | ||
| J3_9QSA_018 | No text annotation | ||
| J3_9QSA_019 | No text annotation | ||
| J3_9QSA_020 | No text annotation | ||
| J3_9QSA_021 | No text annotation | ||
| J3_9QSA_022 | No text annotation | ||
| J3_9QSA_023 | No text annotation | ||
| J3_9QSA_024 | No text annotation | ||
| J3_9QSA_025 | No text annotation | ||
| J3_9QSA_026 | No text annotation | ||
| J3_9QSA_027 | No text annotation | ||
| J3_9QSA_028 | No text annotation | ||
| J3_9QSA_029 | No text annotation | ||
| J3_9QSA_030 | No text annotation | ||
| J3_9QSA_031 | No text annotation | ||
| J3_9QSA_032 | No text annotation | ||
| J3_9QSA_033 | No text annotation | ||
| J3_9QSA_034 | No text annotation | ||
| J3_9QSA_035 | No text annotation | ||
| J3_9QSA_036 | No text annotation | ||
| J3_9QSA_037 | No text annotation | ||
| J3_9QSA_038 | No text annotation | ||
| J3_9QSA_039 | No text annotation | ||
| J3_9QSA_040 | No text annotation | ||
| J4_9QSA_001 | No text annotation | ||
| J4_9QSA_002 | No text annotation | ||
| J4_9QSA_003 | No text annotation | ||
| J4_9QSA_004 | No text annotation | ||
| J4_9QSA_005 | No text annotation | ||
| J4_9QSA_006 | No text annotation | ||
| J4_9QSA_007 | No text annotation | ||
| J4_9QSA_008 | No text annotation | ||
| J4_9QSA_009 | No text annotation | ||
| J4_9QSA_010 | No text annotation | ||
| J4_9QSA_011 | No text annotation | ||
| J4_9QSA_012 | No text annotation | ||
| J4_9QSA_013 | No text annotation | ||
| J4_9QSA_014 | tRNA junction | ||
| J5_9QSA_001 | No text annotation | ||
| J5_9QSA_002 | No text annotation | ||
| J5_9QSA_003 | No text annotation | ||
| J5_9QSA_004 | No text annotation | ||
| J5_9QSA_005 | No text annotation | ||
| J5_9QSA_006 | No text annotation | ||
| J5_9QSA_007 | No text annotation | ||
| J5_9QSA_008 | No text annotation | ||
| J5_9QSA_009 | No text annotation | ||
| J6_9QSA_001 | No text annotation | ||
| J6_9QSA_002 | No text annotation | ||
| J6_9QSA_003 | No text annotation | ||
| J7_9QSA_001 | No text annotation |
Coloring options: