HL_9QSA_050

3D structure

PDB id

9QSA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse Ribosome rotated-1 PRE state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GAGUAACUAUGACUC

Length

15 nucleotides

Bulged bases

9QSA|1|A2|A|3416

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QSA|1|A2|G|3411
9QSA|1|A2|A|3412
9QSA|1|A2|G|3413
9QSA|1|A2|U|3414
9QSA|1|A2|A|3415
9QSA|1|A2|A|3416
9QSA|1|A2|C|3417
9QSA|1|A2|U|3418
9QSA|1|A2|A|3419
9QSA|1|A2|U|3420
9QSA|1|A2|G|3421
9QSA|1|A2|A|3422
9QSA|1|A2|C|3423
9QSA|1|A2|U|3424
9QSA|1|A2|C|3425

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain Bz

Transfer RNA; tRNA

Chain T3

Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein

Chain m2

Small subunit ribosomal RNA; SSU rRNA

Chain n2

Transfer RNA; tRNA