HL_9QSA_054

3D structure

PDB id

9QSA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse Ribosome rotated-1 PRE state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

UCAAACGGUAACG

Length

13 nucleotides

Bulged bases

9QSA|1|A2|A|3866, 9QSA|1|A2|C|3873

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QSA|1|A2|U|3862
9QSA|1|A2|C|3863
9QSA|1|A2|A|3864
9QSA|1|A2|A|3865
9QSA|1|A2|A|3866
9QSA|1|A2|C|3867
9QSA|1|A2|G|3868
9QSA|1|A2|G|3869
9QSA|1|A2|U|3870
9QSA|1|A2|A|3871
9QSA|1|A2|A|3872
9QSA|1|A2|C|3873
9QSA|1|A2|G|3874

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain D1

Large ribosomal subunit protein uL16

Chain N2

Large ribosomal subunit protein eL21

Chain V2

Large ribosomal subunit protein eL29