HL_9QSA_059

3D structure

PDB id

9QSA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse Ribosome rotated-1 PRE state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

UUUGGGUUUUA

Length

11 nucleotides

Bulged bases

9QSA|1|A2|U|4006

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QSA|1|A2|U|4004
9QSA|1|A2|U|4005
9QSA|1|A2|U|4006
9QSA|1|A2|G|4007
9QSA|1|A2|G|4008
9QSA|1|A2|G|4009
9QSA|1|A2|U|4010
9QSA|1|A2|U|4011
9QSA|1|A2|U|4012
9QSA|1|A2|U|4013
9QSA|1|A2|A|4014

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain F1

Large ribosomal subunit protein eL13

Chain U2

Large ribosomal subunit protein uL15

Chain c2

Large ribosomal subunit protein eL36

Chain i2

Large ribosomal subunit protein eL42