HL_9QSA_083

3D structure

PDB id

9QSA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse Ribosome rotated-1 PRE state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GUCGCCGUGCC

Length

11 nucleotides

Bulged bases

9QSA|1|m2|G|387

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QSA|1|m2|G|379
9QSA|1|m2|U|380
9QSA|1|m2|C|381
9QSA|1|m2|G|382
9QSA|1|m2|C|383
9QSA|1|m2|C|384
9QSA|1|m2|G|385
9QSA|1|m2|U|386
9QSA|1|m2|G|387
9QSA|1|m2|C|388
9QSA|1|m2|C|389

Current chains

Chain m2

18S ribosomal RNA

Nearby chains

Chain u2

Small ribosomal subunit protein eS8

Chain w2

Small ribosomal subunit protein uS17