HL_9QSA_085

3D structure

PDB id

9QSA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse Ribosome rotated-1 PRE state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CCUGAGAAACGG

Length

12 nucleotides

Bulged bases

9QSA|1|m2|A|450, 9QSA|1|m2|C|452, 9QSA|1|m2|G|453

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QSA|1|m2|C|443
9QSA|1|m2|C|444
9QSA|1|m2|U|445
9QSA|1|m2|G|446
9QSA|1|m2|A|447
9QSA|1|m2|G|448
9QSA|1|m2|A|449
9QSA|1|m2|A|450
9QSA|1|m2|A|451
9QSA|1|m2|C|452
9QSA|1|m2|G|453
9QSA|1|m2|G|454

Current chains

Chain m2

18S ribosomal RNA

Nearby chains

Chain K3

Small ribosomal subunit protein eS6

Chain Q3

Small ribosomal subunit protein eS24

Chain r2

Small ribosomal subunit protein eS4

Chain u2

Small ribosomal subunit protein eS8