HL_9QSA_091

3D structure

PDB id

9QSA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse Ribosome rotated-1 PRE state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

UG(PSU)(PSU)CAAAG

Length

9 nucleotides

Bulged bases

9QSA|1|m2|G|823

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QSA|1|m2|U|822
9QSA|1|m2|G|823
9QSA|1|m2|PSU|824
9QSA|1|m2|PSU|825
9QSA|1|m2|C|826
9QSA|1|m2|A|827
9QSA|1|m2|A|828
9QSA|1|m2|A|829
9QSA|1|m2|G|830

Current chains

Chain m2

18S ribosomal RNA

Nearby chains

Chain L3

Small ribosomal subunit protein uS4

Chain Q3

Small ribosomal subunit protein eS24

Chain r2

Small ribosomal subunit protein eS4