HL_9R3A_006

3D structure

PDB id

9R3A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Stalled Beta-Galactosidase 70S Ribosome Nascent Chain

Experimental method

ELECTRON MICROSCOPY

Resolution

2.86 Å

Loop

Sequence

AACUGAGACACGGU

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9R3A_006 not in the Motif Atlas

Homologous match to HL_6CZR_079

Geometric discrepancy: 0.1566

The information below is about HL_6CZR_079

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81205.2

Basepair signature

cWW-cWW-tWH-F-tWH-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

9R3A|1|A|A|294
9R3A|1|A|A|295
9R3A|1|A|C|296
9R3A|1|A|U|297
9R3A|1|A|G|298
9R3A|1|A|A|299
9R3A|1|A|G|300
9R3A|1|A|A|301
9R3A|1|A|C|302
9R3A|1|A|A|303
9R3A|1|A|C|304
9R3A|1|A|G|305
9R3A|1|A|G|306
9R3A|1|A|U|307

Current chains

Chain A

16S rRNA

Nearby chains

Chain P

Small ribosomal subunit protein bS16

Chain T

Small ribosomal subunit protein bS20