HL_9R3A_047

3D structure

PDB id

9R3A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Stalled Beta-Galactosidase 70S Ribosome Nascent Chain

Experimental method

ELECTRON MICROSCOPY

Resolution

2.86 Å

Loop

Sequence

ACACGUGGUAU

Length

11 nucleotides

Bulged bases

9R3A|1|a|G|386

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9R3A_047 not in the Motif Atlas

Homologous match to HL_7A0S_013

Geometric discrepancy: 0.3299

The information below is about HL_7A0S_013

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91503.8

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

9R3A|1|a|A|382
9R3A|1|a|C|383
9R3A|1|a|A|384
9R3A|1|a|C|385
9R3A|1|a|G|386
9R3A|1|a|U|387
9R3A|1|a|G|388
9R3A|1|a|G|389
9R3A|1|a|U|390
9R3A|1|a|A|391
9R3A|1|a|U|392

Current chains

Chain a

23S rRNA

Nearby chains

Chain 5

E-site tRNA

Chain w

Large ribosomal subunit protein bL28