HL_9R3A_098

3D structure

PDB id

9R3A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Stalled Beta-Galactosidase 70S Ribosome Nascent Chain

Experimental method

ELECTRON MICROSCOPY

Resolution

2.86 Å

Loop

Sequence

GAAGACGAC

Length

9 nucleotides

Bulged bases

9R3A|1|a|A|2820

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9R3A_098 not in the Motif Atlas

Homologous match to HL_7A0S_067

Geometric discrepancy: 0.1619

The information below is about HL_7A0S_067

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_37889.1

Basepair signature

cWW-cSW-F-F-F-F

Number of instances in this motif group

12

Unit IDs

9R3A|1|a|G|2819
9R3A|1|a|A|2820
9R3A|1|a|A|2821
9R3A|1|a|G|2822
9R3A|1|a|A|2823
9R3A|1|a|C|2824
9R3A|1|a|G|2825
9R3A|1|a|A|2826
9R3A|1|a|C|2827

Current chains

Chain a

23S rRNA

Nearby chains

Chain d

50S ribosomal protein L3

Chain m

Large ribosomal subunit protein bL17