HL_9R3D_003
3D structure
- PDB id
- 9R3D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the human pre-Bact-OTS complex (whole map)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.12 Å
Loop
- Sequence
- UGCGCAA
- Length
- 7 nucleotides
- Bulged bases
- 9R3D|1|6|C|68
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9R3D_003 not in the Motif Atlas
- Homologous match to HL_6ASO_001
- Geometric discrepancy: 0.3395
- The information below is about HL_6ASO_001
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_34789.6
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 434
Unit IDs
9R3D|1|6|U|64
9R3D|1|6|G|65
9R3D|1|6|C|66
9R3D|1|6|G|67
9R3D|1|6|C|68
9R3D|1|6|A|69
9R3D|1|6|A|70
Current chains
- Chain 6
- U6 snRNA
Nearby chains
- Chain 5
- U5 spliceosomal RNA; U5 snRNA
- Chain A
- Pre-mRNA-processing-splicing factor 8
- Chain X
- WW domain-binding protein 11
- Chain Z
- pre-mRNA
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