HL_9RFW_066

3D structure

PDB id

9RFW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Manikomycin bound to the Escherichia coli 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

CUGAAAGCAUCUAAG

Length

15 nucleotides

Bulged bases

9RFW|1|a|G|2751, 9RFW|1|a|C|2755

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RFW|1|a|C|2745
9RFW|1|a|U|2746
9RFW|1|a|G|2747
9RFW|1|a|A|2748
9RFW|1|a|A|2749
9RFW|1|a|A|2750
9RFW|1|a|G|2751
9RFW|1|a|C|2752
9RFW|1|a|A|2753
9RFW|1|a|U|2754
9RFW|1|a|C|2755
9RFW|1|a|U|2756
9RFW|1|a|A|2757
9RFW|1|a|A|2758
9RFW|1|a|G|2759

Current chains

Chain a

23S rRNA

Nearby chains

Chain 3

Large ribosomal subunit protein bL36A

Chain g

Large ribosomal subunit protein uL6

Chain i

Large ribosomal subunit protein uL13