HL_9RG7_012
3D structure
- PDB id
- 9RG7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In vitro reconstituted NAA40-NAC bound 80S
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.72 Å
Loop
- Sequence
- GUCCCC
- Length
- 6 nucleotides
- Bulged bases
- 9RG7|1|L5|U|1179, 9RG7|1|L5|C|1180, 9RG7|1|L5|C|1182
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9RG7_012 not in the Motif Atlas
- Homologous match to HL_8GLP_014
- Geometric discrepancy: 0.1588
- The information below is about HL_8GLP_014
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_12626.2
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 17
Unit IDs
9RG7|1|L5|G|1178
9RG7|1|L5|U|1179
9RG7|1|L5|C|1180
9RG7|1|L5|C|1181
9RG7|1|L5|C|1182
9RG7|1|L5|C|1183
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain L7
- 5S ribosomal RNA; 5S rRNA
- Chain LD
- 60S ribosomal protein L5
- Chain LI
- 60S ribosomal protein L10
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