3D structure

PDB id
9RG7 (explore in PDB, NAKB, or RNA 3D Hub)
Description
In vitro reconstituted NAA40-NAC bound 80S
Experimental method
ELECTRON MICROSCOPY
Resolution
2.72 Å

Loop

Sequence
GACUCAACAC
Length
10 nucleotides
Bulged bases
9RG7|1|S2|A|1253
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9RG7|1|S2|G|1245
9RG7|1|S2|A|1246
9RG7|1|S2|C|1247
9RG7|1|S2|U|1248
9RG7|1|S2|C|1249
9RG7|1|S2|A|1250
9RG7|1|S2|A|1251
9RG7|1|S2|C|1252
9RG7|1|S2|A|1253
9RG7|1|S2|C|1254

Current chains

Chain S2
18S rRNA

Nearby chains

Chain SP
40S ribosomal protein S15
Chain SQ
40S ribosomal protein S16
Chain SU
40S ribosomal protein S20
Chain Sd
40S ribosomal protein S29

Coloring options:

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