HL_9RHU_025
3D structure
- PDB id
- 9RHU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome in complex with eRF1-AAQ, stalled at the Stop codon in mutated F2A sequence
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.65 Å
Loop
- Sequence
- AUUGAUAGCU
- Length
- 10 nucleotides
- Bulged bases
- 9RHU|1|A1|U|1301, 9RHU|1|A1|G|1303
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9RHU_025 not in the Motif Atlas
- Homologous match to HL_9H3G_100
- Geometric discrepancy: 0.2254
- The information below is about HL_9H3G_100
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_98423.6
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 16
Unit IDs
9RHU|1|A1|A|1296
9RHU|1|A1|U|1297
9RHU|1|A1|U|1298
9RHU|1|A1|G|1299
9RHU|1|A1|A|1300
9RHU|1|A1|U|1301
9RHU|1|A1|A|1302
9RHU|1|A1|G|1303
9RHU|1|A1|C|1304
9RHU|1|A1|U|1305
Current chains
- Chain A1
- 18S rRNA
Nearby chains
- Chain D1
- Ubiquitin-ribosomal protein eS31 fusion protein
- Chain H1
- Small ribosomal subunit protein uS14
- Chain a1
- Small ribosomal subunit protein uS19
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