Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
HL_9RHU_0011/A1/7:17No text annotation
HL_9RHU_0021/A1/69:80No text annotation
HL_9RHU_0031/A1/156:162No text annotation
HL_9RHU_0051/A1/289:296No text annotation
HL_9RHU_0061/A1/323:330No text annotation
HL_9RHU_0071/A1/378:388No text annotation
HL_9RHU_0081/A1/417:422No text annotation
HL_9RHU_0091/A1/442:453No text annotation
HL_9RHU_0101/A1/463:468No text annotation
HL_9RHU_0111/A1/499:505No text annotation
HL_9RHU_0131/A1/570:582No text annotation
HL_9RHU_0141/A1/619:624No text annotation
HL_9RHU_0151/A1/821:829No text annotation
HL_9RHU_0181/A1/958:967No text annotation
HL_9RHU_0191/A1/995:1000No text annotation
HL_9RHU_0201/A1/1055:1065No text annotation
HL_9RHU_0211/A1/1115:1120No text annotation
HL_9RHU_0221/A1/1142:1147No text annotation
HL_9RHU_0231/A1/1179:1184No text annotation
HL_9RHU_0241/A1/1246:1255No text annotation
HL_9RHU_0251/A1/1296:1305No text annotation
HL_9RHU_0261/A1/1354:1359No text annotation
HL_9RHU_0271/A1/1367:1374No text annotation
HL_9RHU_0281/A1/1418:1423No text annotation
HL_9RHU_0291/A1/1461:1467No text annotation
HL_9RHU_0301/A1/1566:1571No text annotation
HL_9RHU_0311/A1/1615:1626No text annotation
HL_9RHU_0321/A1/1659:1667No text annotation
HL_9RHU_0341/A1/1848:1853No text annotation
HL_9RHU_0351/A3/37:44No text annotation
HL_9RHU_0361/A3/68:73No text annotation
HL_9RHU_0371/A3/89:95No text annotation
HL_9RHU_0381/A3/131:137No text annotation
HL_9RHU_0391/A3/204:211No text annotation
HL_9RHU_0401/A3/222:226No text annotation
HL_9RHU_0411/A3/230:238No text annotation
HL_9RHU_0421/A3/289:298No text annotation
HL_9RHU_0431/A3/314:323No text annotation
HL_9RHU_0441/A3/368:373No text annotation
HL_9RHU_0451/A3/393:398No text annotation
HL_9RHU_0471/A3/862:870No text annotation
HL_9RHU_0481/A3/1069:1074No text annotation
HL_9RHU_0491/A3/1261:1270No text annotation
HL_9RHU_0501/A3/1308:1317No text annotation
HL_9RHU_0511/A3/1333:1338No text annotation
HL_9RHU_0521/A3/1392:1403No text annotation
HL_9RHU_0531/A3/1435:1439No text annotation
HL_9RHU_0541/A3/1516:1521No text annotation
HL_9RHU_0551/A3/1548:1557No text annotation
HL_9RHU_0561/A3/1582:1590No text annotation
HL_9RHU_0571/A3/1630:1635No text annotation
HL_9RHU_0591/A3/1755:1762No text annotation
HL_9RHU_0601/A3/1803:1809No text annotation
HL_9RHU_0611/A3/1825:1832No text annotation
HL_9RHU_0621/A3/1917:1927No text annotation
HL_9RHU_0631/A3/1945:1952No text annotation
HL_9RHU_0641/A3/2100:2104No text annotation
HL_9RHU_0651/A3/2160:2165No text annotation
HL_9RHU_0661/A3/2219:2227No text annotation
HL_9RHU_0671/A3/2263:2269No text annotation
HL_9RHU_0681/A3/2301:2306No text annotation
HL_9RHU_0691/A3/2312:2314No text annotation
HL_9RHU_0711/A3/2366:2375No text annotation
HL_9RHU_0731/A3/2421:2426No text annotation
HL_9RHU_0741/A3/2467:2475No text annotation
HL_9RHU_0751/A3/2507:2513No text annotation
HL_9RHU_0761/A3/2548:2553No text annotation
HL_9RHU_0771/A3/2581:2585No text annotation
HL_9RHU_0781/A3/2635:2642No text annotation
HL_9RHU_0791/A3/2653:2659No text annotation
HL_9RHU_0801/A3/2715:2720No text annotation
HL_9RHU_0811/A3/3346:3350No text annotation
HL_9RHU_0821/A3/3371:3381No text annotation
HL_9RHU_0831/A3/3400:3406No text annotation
HL_9RHU_0841/A3/3456:3461No text annotation
HL_9RHU_0851/A3/3489:3499No text annotation
HL_9RHU_0861/A3/3528:3536No text annotation
HL_9RHU_0871/A3/3605:3614No text annotation
HL_9RHU_0891/A3/3939:3947No text annotation
HL_9RHU_0901/A3/3956:3968No text annotation
HL_9RHU_0911/A3/3996:4004No text annotation
HL_9RHU_0921/A3/4016:4023No text annotation
HL_9RHU_0931/A3/4047:4055No text annotation
HL_9RHU_0941/A3/4067:4072No text annotation
HL_9RHU_0951/A3/4098:4108No text annotation
HL_9RHU_0961/A3/4163:4171No text annotation
HL_9RHU_0971/A3/4220:4227No text annotation
HL_9RHU_0981/A3/4243:4249No text annotation
HL_9RHU_0991/A3/4286:4291No text annotation
HL_9RHU_1001/A3/4349:4354No text annotation
HL_9RHU_1011/A3/4392:4397No text annotation
HL_9RHU_1021/A3/4434:4448No text annotation
HL_9RHU_1031/A3/4645:4654No text annotation
HL_9RHU_1041/A3/4714:4722No text annotation
HL_9RHU_1051/A3/4760:4767No text annotation
HL_9RHU_1061/B3/32:45No text annotation
geometric
HL_8QYX_071
HL_01182.1
HL_9RHU_1071/B3/36:41No text annotation
homologous
HL_7A0S_069
HL_59381.3
HL_9RHU_1081/B3/86:91GNRA
homologous
HL_4V9F_072
HL_34789.5
HL_9RHU_1091/C3/47:56No text annotation
HL_9RHU_1101/C3/68:90No text annotation
HL_9RHU_1111/C3/107:112No text annotation
HL_9RHU_1121/C3/122:128No text annotation
HL_9RHU_1151/J1/53:61T-loop with 2 stacked bulged bases
homologous
HL_1QU2_003
HL_33597.4
HL_9RHU_1161/K1/12:23No text annotation
homologous
HL_4QEI_001
HL_76195.1
HL_9RHU_1171/K1/31:39tRNA anticodon loop
homologous
HL_9MTS_102
HL_81376.3
HL_9RHU_1181/K1/53:61T-loop with 2 stacked bulged bases
homologous
HL_5WWT_002
HL_33597.4

Problematic loops

#loop idProblemSequence
HL_9RHU_004No text annotation
HL_9RHU_012No text annotation
HL_9RHU_016No text annotation
HL_9RHU_017No text annotation
HL_9RHU_033No text annotation
HL_9RHU_046No text annotation
HL_9RHU_058No text annotation
HL_9RHU_070No text annotation
HL_9RHU_072No text annotation
HL_9RHU_088No text annotation
HL_9RHU_113tRNA D-loop
HL_9RHU_114tRNA anticodon loop

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
IL_9RHU_0011/A1/23:25,
1/A1/650:652
No text annotation
IL_9RHU_0021/A1/34:36,
1/A1/520:522
No text annotation
IL_9RHU_0031/A1/37:40,
1/A1/515:519
No text annotation
IL_9RHU_0041/A1/41:47,
1/A1/480:482
No text annotation
IL_9RHU_0051/A1/49:51,
1/A1/477:478
No text annotation
IL_9RHU_0061/A1/57:62,
1/A1/86:88
No text annotation
IL_9RHU_0071/A1/63:68,
1/A1/81:85
No text annotation
IL_9RHU_0081/A1/108:112,
1/A1/350:354
No text annotation
IL_9RHU_0091/A1/112:115,
1/A1/349:350
No text annotation
IL_9RHU_0101/A1/116:121,
1/A1/344:348
No text annotation
IL_9RHU_0111/A1/145:151,
1/A1/167:174
No text annotation
IL_9RHU_0121/A1/152:154,
1/A1/164:166
No text annotation
IL_9RHU_0131/A1/188:192,
1/A1/207:211
No text annotation
IL_9RHU_0141/A1/216:219,
1/A1/303:310
No text annotation
IL_9RHU_0161/A1/313:315,
1/A1/337:338
No text annotation
IL_9RHU_0171/A1/318:320,
1/A1/333:334
No text annotation
IL_9RHU_0181/A1/360:365,
1/A1/397:404
No text annotation
IL_9RHU_0191/A1/367:372,
1/A1/394:395
No text annotation
IL_9RHU_0201/A1/412:414,
1/A1/425:430
No text annotation
IL_9RHU_0211/A1/438:440,
1/A1/455:457
No text annotation
IL_9RHU_0221/A1/460:462,
1/A1/469:471
No text annotation
IL_9RHU_0231/A1/488:490,
1/A1/512:513
No text annotation
IL_9RHU_0241/A1/492:496,
1/A1/509:510
No text annotation
IL_9RHU_0251/A1/496:497,
1/A1/507:509
No text annotation
IL_9RHU_0261/A1/530:531,
1/A1/555:557
No text annotation
IL_9RHU_0281/A1/564:566,
1/A1/586:593
No text annotation
IL_9RHU_0291/A1/567:570,
1/A1/582:585
No text annotation
IL_9RHU_0301/A1/600:607,
1/A1/637:638
No text annotation
IL_9RHU_0311/A1/607:609,
1/A1/636:637
No text annotation
IL_9RHU_0321/A1/612:618,
1/A1/625:633
No text annotation
IL_9RHU_0331/A1/664:666,
1/A1/1163:1165
No text annotation
IL_9RHU_0341/A1/666:672,
1/A1/1162:1163
No text annotation
IL_9RHU_0351/A1/674:676,
1/A1/1031:1033
No text annotation
IL_9RHU_0361/A1/677:681,
1/A1/1026:1030
No text annotation
IL_9RHU_0401/A1/803:804,
1/A1/861:864
No text annotation
IL_9RHU_0411/A1/806:808,
1/A1/857:859
No text annotation
IL_9RHU_0421/A1/808:816,
1/A1/850:857
No text annotation
IL_9RHU_0431/A1/834:835,
1/A1/839:842
No text annotation
IL_9RHU_0441/A1/875:877,
1/A1/911:913
No text annotation
IL_9RHU_0451/A1/878:880,
1/A1/908:910
No text annotation
IL_9RHU_0461/A1/923:924,
1/A1/1020:1023
No text annotation
IL_9RHU_0471/A1/926:928,
1/A1/1015:1018
No text annotation
IL_9RHU_0481/A1/929:932,
1/A1/1011:1014
No text annotation
IL_9RHU_0491/A1/932:936,
1/A1/1008:1011
No text annotation
IL_9RHU_0501/A1/943:946,
1/A1/982:985
No text annotation
IL_9RHU_0511/A1/953:957,
1/A1/968:975
No text annotation
IL_9RHU_0521/A1/1043:1048,
1/A1/1072:1074
No text annotation
IL_9RHU_0531/A1/1048:1052,
1/A1/1068:1072
No text annotation
IL_9RHU_0541/A1/1092:1094,
1/A1/1153:1159
No text annotation
IL_9RHU_0551/A1/1099:1102,
1/A1/1132:1135
No text annotation
IL_9RHU_0561/A1/1102:1104,
1/A1/1130:1132
No text annotation
IL_9RHU_0571/A1/1109:1111,
1/A1/1124:1125
No text annotation
IL_9RHU_0581/A1/1169:1176,
1/A1/1187:1192
No text annotation
IL_9RHU_0591/A1/1204:1205,
1/A1/1695:1697
No text annotation
IL_9RHU_0601/A1/1207:1209,
1/A1/1692:1693
No text annotation
IL_9RHU_0611/A1/1215:1218,
1/A1/1682:1686
No text annotation
IL_9RHU_0621/A1/1231:1233,
1/A1/1527:1529
No text annotation
IL_9RHU_0631/A1/1236:1237,
1/A1/1522:1524
No text annotation
IL_9RHU_0641/A1/1271:1273,
1/A1/1511:1513
No text annotation
IL_9RHU_0651/A1/1282:1288,
1/A1/1315:1317
No text annotation
IL_9RHU_0661/A1/1282:1291,
1/A1/1310:1317
No text annotation
IL_9RHU_0671/A1/1288:1291,
1/A1/1310:1315
No text annotation
IL_9RHU_0681/A1/1292:1294,
1/A1/1307:1309
No text annotation
IL_9RHU_0691/A1/1326:1328,
1/A1/1503:1504
No text annotation
IL_9RHU_0701/A1/1330:1334,
1/A1/1499:1501
No text annotation
IL_9RHU_0711/A1/1330:1336,
1/A1/1493:1501
No text annotation
IL_9RHU_0721/A1/1334:1336,
1/A1/1493:1499
No text annotation
IL_9RHU_0731/A1/1338:1339,
1/A1/1489:1491
No text annotation
IL_9RHU_0741/A1/1348:1350,
1/A1/1381:1383
No text annotation
IL_9RHU_0751/A1/1364:1366,
1/A1/1375:1376
No text annotation
IL_9RHU_0761/A1/1396:1400,
1/A1/1448:1451
No text annotation
IL_9RHU_0771/A1/1403:1406,
1/A1/1442:1445
No text annotation
IL_9RHU_0781/A1/1409:1410,
1/A1/1433:1439
No text annotation
IL_9RHU_0791/A1/1413:1414,
1/A1/1428:1430
No text annotation
IL_9RHU_0801/A1/1417:1418,
1/A1/1423:1425
No text annotation
IL_9RHU_0811/A1/1538:1540,
1/A1/1595:1597
No text annotation
IL_9RHU_0821/A1/1542:1551,
1/A1/1583:1593
No text annotation
IL_9RHU_0831/A1/1551:1559,
1/A1/1578:1583
No text annotation
IL_9RHU_0841/A1/1561:1563,
1/A1/1574:1576
No text annotation
IL_9RHU_0851/A1/1605:1611,
1/A1/1630:1636
No text annotation
IL_9RHU_0861/A1/1701:1703,
1/A1/1834:1837
No text annotation
IL_9RHU_0871/A1/1703:1706,
1/A1/1830:1834
No text annotation
IL_9RHU_0881/A1/1707:1709,
1/A1/1827:1829
No text annotation
IL_9RHU_0891/A1/1709:1712,
1/A1/1823:1827
No text annotation
IL_9RHU_0901/A1/1715:1717,
1/A1/1818:1820
No text annotation
IL_9RHU_0911/A1/1718:1721,
1/A1/1814:1817
No text annotation
IL_9RHU_0921/A1/1721:1723,
1/A1/1813:1814
No text annotation
IL_9RHU_0931/A1/1730:1732,
1/A1/1804:1806
No text annotation
IL_9RHU_0941/A1/1734:1737,
1/A1/1799:1802
No text annotation
IL_9RHU_0951/A1/1740:1742,
1/A1/1794:1796
No text annotation
IL_9RHU_0961/A1/1743:1747,
1/A1/1789:1793
No text annotation
IL_9RHU_0971/A1/1751:1752,
1/A1/1783:1785
No text annotation
IL_9RHU_0991/A3/6:7,
1/C3/149:151
No text annotation
IL_9RHU_1001/A3/12:14,
1/C3/143:144
No text annotation
IL_9RHU_1011/A3/16:18,
1/C3/139:141
No text annotation
IL_9RHU_1021/A3/26:27,
1/A3/55:57
No text annotation
IL_9RHU_1031/A3/30:37,
1/A3/44:52
No text annotation
IL_9RHU_1041/A3/81:88,
1/A3/96:102
No text annotation
IL_9RHU_1051/A3/118:121,
1/A3/152:153
No text annotation
IL_9RHU_1061/A3/118:122,
1/A3/147:153
No text annotation
IL_9RHU_1071/A3/121:122,
1/A3/147:152
No text annotation
IL_9RHU_1081/A3/125:126,
1/A3/142:144
No text annotation
IL_9RHU_1091/A3/168:173,
1/A3/263:267
No text annotation
IL_9RHU_1111/A3/184:189,
1/A3/252:253
No text annotation
IL_9RHU_1121/A3/195:196,
1/A3/244:246
No text annotation
IL_9RHU_1131/A3/199:201,
1/A3/214:215
No text annotation
IL_9RHU_1141/A3/339:342,
1/C3/32:33
No text annotation
IL_9RHU_1151/A3/348:350,
1/C3/25:26
No text annotation
IL_9RHU_1161/A3/387:390,
1/A3/401:414
No text annotation
IL_9RHU_1171/A3/415:421,
1/C3/13:19
No text annotation
IL_9RHU_1181/A3/443:444,
1/A3/1246:1248
No text annotation
IL_9RHU_1191/A3/444:446,
1/A3/1244:1246
No text annotation
IL_9RHU_1201/A3/448:450,
1/A3/1241:1242
No text annotation
IL_9RHU_1211/A3/459:460,
1/A3/689:691
No text annotation
IL_9RHU_1221/A3/462:464,
1/A3/685:687
No text annotation
IL_9RHU_1231/A3/466:472,
1/A3/676:683
No text annotation
IL_9RHU_1241/A3/481:483,
1/A3/666:667
No text annotation
IL_9RHU_1251/A3/483:486,
1/A3/665:666
No text annotation
IL_9RHU_1261/A3/488:489,
1/A3/659:663
No text annotation
IL_9RHU_1271/A3/492:494,
1/A3/655:656
No text annotation
IL_9RHU_1281/A3/498:500,
1/A3/650:651
No text annotation
IL_9RHU_1291/A3/501:506,
1/A3/648:649
No text annotation
IL_9RHU_1301/A3/510:512,
1/A3/643:644
No text annotation
IL_9RHU_1311/A3/514:517,
1/A3/640:641
No text annotation
IL_9RHU_1331/A3/703:704,
1/A3/1230:1232
No text annotation
IL_9RHU_1341/A3/717:718,
1/A3/842:845
No text annotation
IL_9RHU_1351/A3/721:725,
1/A3/838:839
No text annotation
IL_9RHU_1361/A3/726:729,
1/A3/827:837
No text annotation
IL_9RHU_1371/A3/731:734,
1/A3/822:825
No text annotation
IL_9RHU_1381/A3/740:747,
1/A3/808:816
No text annotation
IL_9RHU_1411/A3/988:989,
1/A3/1123:1125
No text annotation
IL_9RHU_1421/A3/997:999,
1/A3/1104:1108
No text annotation
IL_9RHU_1431/A3/1001:1002,
1/A3/1100:1102
No text annotation
IL_9RHU_1441/A3/1007:1009,
1/A3/1093:1095
No text annotation
IL_9RHU_1461/A3/1064:1066,
1/A3/1077:1079
No text annotation
IL_9RHU_1481/A3/1301:1304,
1/A3/1323:1326
No text annotation
IL_9RHU_1491/A3/1301:1305,
1/A3/1320:1326
No text annotation
IL_9RHU_1501/A3/1304:1305,
1/A3/1320:1323
No text annotation
IL_9RHU_1511/A3/1380:1384,
1/A3/1410:1415
No text annotation
IL_9RHU_1521/A3/1386:1389,
1/A3/1405:1408
No text annotation
IL_9RHU_1531/A3/1390:1392,
1/A3/1403:1404
No text annotation
IL_9RHU_1541/A3/1422:1423,
1/A3/1451:1453
No text annotation
IL_9RHU_1551/A3/1429:1431,
1/A3/1444:1445
No text annotation
IL_9RHU_1561/A3/1434:1435,
1/A3/1439:1441
No text annotation
IL_9RHU_1571/A3/1475:1477,
1/A3/1610:1612
No text annotation
IL_9RHU_1581/A3/1477:1481,
1/A3/1603:1610
No text annotation
IL_9RHU_1591/A3/1500:1501,
1/A3/1567:1569
No text annotation
IL_9RHU_1601/A3/1505:1506,
1/A3/1531:1533
No text annotation
IL_9RHU_1611/A3/1506:1510,
1/A3/1527:1531
No text annotation
IL_9RHU_1621/A3/1541:1544,
1/A3/1560:1562
No text annotation
IL_9RHU_1631/A3/1545:1547,
1/A3/1558:1559
No text annotation
IL_9RHU_1641/A3/1579:1581,
1/A3/1591:1595
No text annotation
IL_9RHU_1651/A3/1626:1628,
1/A3/1637:1639
No text annotation
IL_9RHU_1661/A3/1641:1643,
1/A3/1787:1790
No text annotation
IL_9RHU_1671/A3/1649:1660,
1/A3/1780:1781
No text annotation
IL_9RHU_1681/A3/1662:1664,
1/A3/1777:1778
No text annotation
IL_9RHU_1691/A3/1671:1676,
1/A3/1731:1736
No text annotation
IL_9RHU_1701/A3/1676:1677,
1/A3/1729:1731
No text annotation
IL_9RHU_1711/A3/1678:1683,
1/A3/1725:1728
No text annotation
IL_9RHU_1721/A3/1685:1688,
1/A3/1720:1723
No text annotation
IL_9RHU_1731/A3/1688:1690,
1/A3/1718:1720
No text annotation
IL_9RHU_1741/A3/1692:1695,
1/A3/1715:1716
No text annotation
IL_9RHU_1761/A3/1753:1755,
1/A3/1762:1763
No text annotation
IL_9RHU_1771/A3/1797:1799,
1/A3/1813:1815
No text annotation
IL_9RHU_1791/A3/1844:1848,
1/A3/2006:2010
No text annotation
IL_9RHU_1801/A3/1850:1857,
1/A3/2003:2004
No text annotation
IL_9RHU_1811/A3/1857:1859,
1/A3/2002:2003
No text annotation
IL_9RHU_1821/A3/1859:1861,
1/A3/2001:2002
No text annotation
IL_9RHU_1831/A3/1865:1872,
1/A3/1992:1997
No text annotation
IL_9RHU_1841/A3/1872:1883,
1/A3/1977:1992
No text annotation
IL_9RHU_1851/A3/1885:1887,
1/A3/1974:1975
No text annotation
IL_9RHU_1861/A3/1896:1904,
1/A3/1961:1965
No text annotation
IL_9RHU_1871/A3/1912:1916,
1/A3/1928:1932
No text annotation
IL_9RHU_1881/A3/1940:1944,
1/A3/1953:1955
No text annotation
IL_9RHU_1891/A3/2022:2024,
1/A3/2115:2116
No text annotation
IL_9RHU_1901/A3/2133:2135,
1/A3/2185:2188
No text annotation
IL_9RHU_1911/A3/2142:2144,
1/A3/2177:2178
No text annotation
IL_9RHU_1921/A3/2145:2152,
1/A3/2172:2176
No text annotation
IL_9RHU_1931/A3/2155:2157,
1/A3/2168:2169
No text annotation
IL_9RHU_1941/A3/2201:2207,
1/A3/3590:3595
No text annotation
IL_9RHU_1951/A3/2249:2252,
1/A3/2626:2627
No text annotation
IL_9RHU_1961/A3/2258:2262,
1/A3/2270:2272
No text annotation
IL_9RHU_1971/A3/2289:2293,
1/A3/2352:2357
No text annotation
IL_9RHU_1981/A3/2320:2322,
1/A3/2342:2343
No text annotation
IL_9RHU_1991/A3/2385:2390,
1/A3/2615:2617
No text annotation
IL_9RHU_2001/A3/2392:2393,
1/A3/2611:2613
No text annotation
IL_9RHU_2011/A3/2432:2436,
1/A3/2595:2599
No text annotation
IL_9RHU_2021/A3/2456:2457,
1/A3/2567:2569
No text annotation
IL_9RHU_2031/A3/2457:2458,
1/A3/2565:2567
No text annotation
IL_9RHU_2041/A3/2489:2491,
1/A3/2528:2531
No text annotation
IL_9RHU_2051/A3/2494:2496,
1/A3/2524:2525
No text annotation
IL_9RHU_2061/A3/2499:2505,
1/A3/2515:2521
No text annotation
IL_9RHU_2071/A3/2547:2548,
1/A3/2553:2555
No text annotation
IL_9RHU_2081/A3/2675:2681,
1/A3/3582:3585
No text annotation
IL_9RHU_2091/A3/2687:2689,
1/A3/3574:3576
No text annotation
IL_9RHU_2101/A3/2690:2693,
1/A3/3572:3573
No text annotation
IL_9RHU_2111/A3/2690:2698,
1/A3/3569:3573
No text annotation
IL_9RHU_2121/A3/2693:2698,
1/A3/3569:3572
No text annotation
IL_9RHU_2131/A3/2710:2715,
1/A3/2720:2726
No text annotation
IL_9RHU_2141/A3/2732:2734,
1/A3/3342:3344
No text annotation
IL_9RHU_2151/A3/2739:2740,
1/A3/3334:3337
No text annotation
IL_9RHU_2161/A3/3364:3365,
1/A3/3559:3561
No text annotation
IL_9RHU_2171/A3/3392:3397,
1/A3/3409:3416
No text annotation
IL_9RHU_2181/A3/3432:3435,
1/A3/3481:3482
No text annotation
IL_9RHU_2191/A3/3436:3437,
1/A3/3477:3480
No text annotation
IL_9RHU_2201/A3/3440:3442,
1/A3/3473:3474
No text annotation
IL_9RHU_2211/A3/3442:3446,
1/A3/3471:3473
No text annotation
IL_9RHU_2221/A3/3447:3453,
1/A3/3464:3470
No text annotation
IL_9RHU_2231/A3/3512:3513,
1/A3/3543:3546
No text annotation
IL_9RHU_2241/A3/3513:3524,
1/A3/3540:3543
No text annotation
IL_9RHU_2251/A3/3627:3630,
1/A3/4309:4311
No text annotation
IL_9RHU_2261/A3/3632:3634,
1/A3/4304:4307
No text annotation
IL_9RHU_2271/A3/3645:3647,
1/A3/4134:4135
No text annotation
IL_9RHU_2281/A3/3648:3649,
1/A3/4130:4133
No text annotation
IL_9RHU_2291/A3/3659:3661,
1/A3/3927:3930
No text annotation
IL_9RHU_2301/A3/3680:3681,
1/A3/3791:3793
No text annotation
IL_9RHU_2321/A3/3702:3705,
1/A3/3766:3779
No text annotation
IL_9RHU_2331/A3/3810:3816,
1/A3/3907:3910
No text annotation
IL_9RHU_2341/A3/3823:3825,
1/A3/3840:3841
No text annotation
IL_9RHU_2351/A3/3861:3863,
1/A3/3895:3897
No text annotation
IL_9RHU_2371/A3/3937:3938,
1/A3/3948:3950
No text annotation
IL_9RHU_2381/A3/3989:3991,
1/A3/4009:4013
No text annotation
IL_9RHU_2391/A3/4037:4039,
1/A3/4063:4064
No text annotation
IL_9RHU_2401/A3/4041:4044,
1/A3/4058:4061
No text annotation
IL_9RHU_2411/A3/4093:4096,
1/A3/4110:4111
No text annotation
IL_9RHU_2421/A3/4146:4147,
1/A3/4188:4190
No text annotation
IL_9RHU_2431/A3/4147:4149,
1/A3/4186:4188
No text annotation
IL_9RHU_2441/A3/4149:4151,
1/A3/4185:4186
No text annotation
IL_9RHU_2451/A3/4151:4153,
1/A3/4181:4185
No text annotation
IL_9RHU_2461/A3/4158:4162,
1/A3/4172:4176
No text annotation
IL_9RHU_2471/A3/4199:4200,
1/A3/4272:4274
No text annotation
IL_9RHU_2481/A3/4202:4204,
1/A3/4266:4270
No text annotation
IL_9RHU_2491/A3/4204:4205,
1/A3/4263:4266
No text annotation
IL_9RHU_2501/A3/4212:4214,
1/A3/4235:4237
No text annotation
IL_9RHU_2511/A3/4212:4216,
1/A3/4231:4237
No text annotation
IL_9RHU_2521/A3/4214:4216,
1/A3/4231:4235
No text annotation
IL_9RHU_2531/A3/4241:4243,
1/A3/4249:4251
No text annotation
IL_9RHU_2541/A3/4283:4284,
1/A3/4293:4295
No text annotation
IL_9RHU_2551/A3/4326:4328,
1/A3/4467:4469
No text annotation
IL_9RHU_2561/A3/4328:4331,
1/A3/4463:4467
No text annotation
IL_9RHU_2571/A3/4336:4338,
1/A3/4364:4366
No text annotation
IL_9RHU_2581/A3/4342:4349,
1/A3/4354:4360
No text annotation
IL_9RHU_2591/A3/4370:4375,
1/A3/4415:4419
No text annotation
IL_9RHU_2601/A3/4378:4383,
1/A3/4408:4412
No text annotation
IL_9RHU_2611/A3/4384:4386,
1/A3/4405:4407
No text annotation
IL_9RHU_2621/A3/4387:4388,
1/A3/4401:4404
No text annotation
IL_9RHU_2631/A3/4426:4431,
1/A3/4451:4456
No text annotation
IL_9RHU_2641/A3/4486:4489,
1/A3/4697:4698
No text annotation
IL_9RHU_2651/A3/4490:4493,
1/A3/4693:4696
No text annotation
IL_9RHU_2661/A3/4496:4498,
1/A3/4687:4690
No text annotation
IL_9RHU_2671/A3/4503:4512,
1/A3/4608:4616
No text annotation
IL_9RHU_2681/A3/4516:4519,
1/A3/4602:4604
No text annotation
IL_9RHU_2691/A3/4624:4627,
1/A3/4670:4673
No text annotation
IL_9RHU_2701/A3/4630:4635,
1/A3/4663:4667
No text annotation
IL_9RHU_2721/A3/4711:4714,
1/A3/4722:4725
No text annotation
IL_9RHU_2731/A3/4731:4733,
1/A3/4796:4798
No text annotation
IL_9RHU_2741/A3/4735:4736,
1/A3/4792:4794
No text annotation
IL_9RHU_2751/A3/4739:4741,
1/A3/4784:4789
No text annotation
IL_9RHU_2761/A3/4742:4748,
1/A3/4778:4783
No text annotation
IL_9RHU_2771/A3/4751:4753,
1/A3/4774:4775
No text annotation
IL_9RHU_2781/A3/4753:4756,
1/A3/4771:4774
No text annotation
IL_9RHU_2791/B3/15:16,
1/B3/62:64
No text annotation
geometric
IL_8QYX_165
IL_05642.4
IL_9RHU_2801/B3/21:27,
1/B3/52:57
No text annotation
geometric
IL_8QYX_166
IL_41504.1
IL_9RHU_2811/B3/28:29,
1/B3/48:51
Major groove minor groove platform; mini C-loop
homologous
IL_4V9F_103
IL_73108.3
IL_9RHU_2821/B3/32:36,
1/B3/41:45
Symmetric double minor groove platform
homologous
IL_4V9F_104
IL_58103.13
IL_9RHU_2831/B3/71:78,
1/B3/98:104
8x7 Sarcin-Ricin; G-bulge
geometric
IL_8QYX_169
IL_26290.1
IL_9RHU_2841/B3/79:81,
1/B3/95:97
Isolated non-canonical cWW pair
homologous
IL_7A0S_107
IL_71625.4
IL_9RHU_2851/B3/82:85,
1/B3/92:94
No text annotation
geometric
IL_8QYX_171
IL_01003.5
IL_9RHU_2861/C3/64:66,
1/C3/92:95
No text annotation

Problematic loops

#loop idProblemSequence
IL_9RHU_015No text annotation
IL_9RHU_027No text annotation
IL_9RHU_037No text annotation
IL_9RHU_038No text annotation
IL_9RHU_039No text annotation
IL_9RHU_098No text annotation
IL_9RHU_110No text annotation
IL_9RHU_132No text annotation
IL_9RHU_139No text annotation
IL_9RHU_140No text annotation
IL_9RHU_145No text annotation
IL_9RHU_147No text annotation
IL_9RHU_175No text annotation
IL_9RHU_178No text annotation
IL_9RHU_231No text annotation
IL_9RHU_236No text annotation
IL_9RHU_271No text annotation

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
J3_9RHU_0011/A1/40:41,
1/A1/482:488,
1/A1/513:515
No text annotation
J3_9RHU_0021/A1/40:47,
1/A1/480:488,
1/A1/513:515
No text annotation
J3_9RHU_0031/A1/223:239,
1/A1/281:289,
1/A1/296:299
No text annotation
J3_9RHU_0041/A1/683:686,
1/A1/918:923,
1/A1/1023:1024
No text annotation
J3_9RHU_0051/A1/683:686,
1/A1/918:924,
1/A1/1020:1024
No text annotation
J3_9RHU_0061/A1/817:820,
1/A1/830:832,
1/A1/844:849
No text annotation
J3_9RHU_0071/A1/939:942,
1/A1/986:994,
1/A1/1001:1005
No text annotation
J3_9RHU_0081/A1/1095:1097,
1/A1/1137:1141,
1/A1/1148:1152
No text annotation
J3_9RHU_0091/A1/1219:1222,
1/A1/1646:1652,
1/A1/1674:1681
No text annotation
J3_9RHU_0101/A1/1226:1229,
1/A1/1531:1533,
1/A1/1639:1642
No text annotation
J3_9RHU_0111/A1/1238:1245,
1/A1/1256:1267,
1/A1/1517:1521
No text annotation
J3_9RHU_0121/A1/1273:1278,
1/A1/1321:1325,
1/A1/1505:1511
No text annotation
J3_9RHU_0131/A1/1341:1346,
1/A1/1385:1390,
1/A1/1482:1487
No text annotation
J3_9RHU_0141/A1/1351:1352,
1/A1/1361:1364,
1/A1/1376:1380
No text annotation
J3_9RHU_0151/A1/1392:1396,
1/A1/1451:1457,
1/A1/1471:1480
No text annotation
J3_9RHU_0161/A1/1533:1537,
1/A1/1598:1605,
1/A1/1636:1639
No text annotation
J3_9RHU_0171/A3/112:116,
1/A3/155:160,
1/A3/275:278
No text annotation
J3_9RHU_0181/A3/196:199,
1/A3/215:228,
1/A3/240:244
No text annotation
J3_9RHU_0191/A3/351:367,
1/A3/374:379,
1/C3/21:24
No text annotation
J3_9RHU_0201/A3/380:387,
1/A3/414:415,
1/C3/19:20
No text annotation
J3_9RHU_0211/A3/380:390,
1/A3/401:415,
1/C3/19:20
No text annotation
J3_9RHU_0221/A3/451:455,
1/A3/695:699,
1/A3/1236:1240
No text annotation
J3_9RHU_0231/A3/1486:1492,
1/A3/1577:1579,
1/A3/1595:1598
No text annotation
J3_9RHU_0241/A3/1501:1503,
1/A3/1535:1539,
1/A3/1564:1567
No text annotation
J3_9RHU_0251/A3/1665:1666,
1/A3/1741:1745,
1/A3/1771:1776
No text annotation
J3_9RHU_0261/A3/1908:1910,
1/A3/1934:1940,
1/A3/1955:1957
No text annotation
J3_9RHU_0271/A3/2236:2242,
1/A3/2648:2650,
1/A3/2662:2665
No text annotation
J3_9RHU_0281/A3/2245:2248,
1/A3/2628:2634,
1/A3/2643:2645
No text annotation
J3_9RHU_0291/A3/2283:2288,
1/A3/2358:2362,
1/A3/2379:2380
No text annotation
J3_9RHU_0301/A3/2294:2299,
1/A3/2308:2319,
1/A3/2344:2351
No text annotation
J3_9RHU_0311/A3/2394:2398,
1/A3/2415:2418,
1/A3/2600:2610
No text annotation
J3_9RHU_0321/A3/2418:2419,
1/A3/2428:2432,
1/A3/2599:2600
No text annotation
J3_9RHU_0331/A3/2441:2445,
1/A3/2580:2581,
1/A3/2585:2590
No text annotation
J3_9RHU_0341/A3/3669:3671,
1/A3/3802:3806,
1/A3/3914:3919
No text annotation
J3_9RHU_0351/A3/3819:3822,
1/A3/3842:3857,
1/A3/3901:3904
No text annotation
J3_9RHU_0361/A3/3974:3976,
1/A3/4077:4088,
1/A3/4116:4121
No text annotation
J3_9RHU_0371/A3/3987:3989,
1/A3/4013:4015,
1/A3/4024:4029
No text annotation
J3_9RHU_0381/A3/4209:4212,
1/A3/4237:4239,
1/A3/4253:4259
No text annotation
J3_9RHU_0391/A3/4498:4501,
1/A3/4618:4622,
1/A3/4675:4687
No text annotation
J3_9RHU_0401/A3/4709:4711,
1/A3/4725:4730,
1/A3/4799:4802
No text annotation
J3_9RHU_0411/B3/9:14,
1/B3/65:66,
1/B3/109:110
No text annotation
geometric
J3_8QYX_024
J3_26985.2
J3_9RHU_0421/C3/44:45,
1/C3/58:64,
1/C3/95:99
No text annotation
J4_9RHU_0011/A1/98:106,
1/A1/356:358,
1/A1/406:410,
1/A1/432:433
No text annotation
J4_9RHU_0021/A1/672:674,
1/A1/1033:1038,
1/A1/1079:1090,
1/A1/1161:1162
No text annotation
J4_9RHU_0031/A3/111:112,
1/A3/278:283,
1/A3/304:310,
1/A3/327:330
No text annotation
J4_9RHU_0041/A3/196:199,
1/A3/215:222,
1/A3/226:228,
1/A3/240:244
No text annotation
J4_9RHU_0051/A3/706:707,
1/A3/855:861,
1/A3/871:878,
1/A3/1222:1228
No text annotation
J4_9RHU_0061/A3/883:885,
1/A3/985:987,
1/A3/1126:1127,
1/A3/1212:1217
No text annotation
J4_9RHU_0071/A3/2208:2214,
1/A3/2232:2234,
1/A3/2667:2672,
1/A3/3588:3589
No text annotation
J4_9RHU_0081/A3/2249:2253,
1/A3/2277:2282,
1/A3/2381:2382,
1/A3/2620:2627
No text annotation
J4_9RHU_0091/A3/2252:2253,
1/A3/2277:2282,
1/A3/2381:2382,
1/A3/2620:2626
No text annotation
J4_9RHU_0101/A3/2294:2299,
1/A3/2308:2312,
1/A3/2314:2319,
1/A3/2344:2351
No text annotation
J4_9RHU_0111/A3/2461:2462,
1/A3/2480:2485,
1/A3/2535:2541,
1/A3/2561:2562
No text annotation
J4_9RHU_0121/A3/3366:3370,
1/A3/3382:3386,
1/A3/3422:3426,
1/A3/3553:3558
No text annotation
J4_9RHU_0131/A3/3428:3430,
1/A3/3484:3485,
1/A3/3503:3512,
1/A3/3546:3551
No text annotation
J4_9RHU_0141/A3/3977:3981,
1/A3/4035:4037,
1/A3/4064:4065,
1/A3/4074:4076
No text annotation
J4_9RHU_0151/A3/3977:3981,
1/A3/4035:4039,
1/A3/4063:4065,
1/A3/4074:4076
No text annotation
J4_9RHU_0161/A3/4333:4336,
1/A3/4366:4367,
1/A3/4422:4424,
1/A3/4458:4461
No text annotation
J4_9RHU_0171/J1/7:10,
1/J1/25:27,
1/J1/43:49,
1/J1/65:66
tRNA junction
homologous
J4_7EQJ_002
J4_95067.1
J4_9RHU_0181/K1/7:10,
1/K1/25:26,
1/K1/44:49,
1/K1/65:66
tRNA junction
homologous
J4_4QEI_001
J4_35610.2
J5_9RHU_0011/A1/30:34,
1/A1/522:528,
1/A1/559:564,
1/A1/593:596,
1/A1/642:645
No text annotation
J5_9RHU_0021/A1/30:34,
1/A1/522:528,
1/A1/559:566,
1/A1/586:596,
1/A1/642:645
No text annotation
J5_9RHU_0031/A1/53:56,
1/A1/89:96,
1/A1/435:437,
1/A1/458:460,
1/A1/471:475
No text annotation
J5_9RHU_0041/A1/123:129,
1/A1/183:185,
1/A1/214:215,
1/A1/311:313,
1/A1/338:342
No text annotation
J5_9RHU_0051/A3/19:21,
1/C3/35:42,
1/C3/101:106,
1/C3/113:114,
1/C3/136:138
No text annotation
J5_9RHU_0061/A3/1279:1284,
1/A3/1471:1474,
1/A3/1613:1616,
1/A3/2131:2133,
1/A3/2188:2194
No text annotation
J5_9RHU_0071/A3/2698:2706,
1/A3/2730:2731,
1/A3/3345:3346,
1/A3/3350:3358,
1/A3/3567:3569
No text annotation
J5_9RHU_0081/A3/3635:3642,
1/A3/4138:4146,
1/A3/4190:4199,
1/A3/4274:4280,
1/A3/4298:4303
No text annotation
J5_9RHU_0091/A3/3652:3655,
1/A3/3934:3937,
1/A3/3950:3951,
1/A3/3973:3974,
1/A3/4121:4127
No text annotation
J6_9RHU_0011/A3/21:26,
1/A3/57:67,
1/A3/74:78,
1/A3/105:109,
1/A3/332:339,
1/C3/33:35
No text annotation
J6_9RHU_0021/A3/1296:1299,
1/A3/1328:1332,
1/A3/1339:1343,
1/A3/1373:1376,
1/A3/1419:1421,
1/A3/1454:1459
No text annotation
J6_9RHU_0031/A3/3652:3655,
1/A3/3934:3937,
1/A3/3950:3951,
1/A3/3973:3976,
1/A3/4077:4088,
1/A3/4116:4127
No text annotation
J7_9RHU_0011/A3/1621:1626,
1/A3/1639:1640,
1/A3/1791:1794,
1/A3/1818:1823,
1/A3/1834:1838,
1/A3/2016:2017,
1/A3/2121:2126
No text annotation

Problematic loops

No problematic loops


Coloring options:
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