HL_9RHU_042

3D structure

PDB id

9RHU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome in complex with eRF1-AAQ, stalled at the Stop codon in mutated F2A sequence

Experimental method

ELECTRON MICROSCOPY

Resolution

2.65 Å

Loop

Sequence

CUUGGGAAUG

Length

10 nucleotides

Bulged bases

9RHU|1|A3|G|294, 9RHU|1|A3|A|295, 9RHU|1|A3|A|296

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RHU|1|A3|C|289
9RHU|1|A3|U|290
9RHU|1|A3|U|291
9RHU|1|A3|G|292
9RHU|1|A3|G|293
9RHU|1|A3|G|294
9RHU|1|A3|A|295
9RHU|1|A3|A|296
9RHU|1|A3|U|297
9RHU|1|A3|G|298

Current chains

Chain A3

28S rRNA

Nearby chains

Chain H2

Large ribosomal subunit protein eL13

Chain J2

Ribosomal protein L15

Chain W2

60S ribosomal protein L27a

Chain j2

Ribosomal protein L36a