HL_9RHU_052

3D structure

PDB id

9RHU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome in complex with eRF1-AAQ, stalled at the Stop codon in mutated F2A sequence

Experimental method

ELECTRON MICROSCOPY

Resolution

2.65 Å

Loop

Sequence

CCUUCCAGUCCG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RHU|1|A3|C|1392
9RHU|1|A3|C|1393
9RHU|1|A3|U|1394
9RHU|1|A3|U|1395
9RHU|1|A3|C|1396
9RHU|1|A3|C|1397
9RHU|1|A3|A|1398
9RHU|1|A3|G|1399
9RHU|1|A3|U|1400
9RHU|1|A3|C|1401
9RHU|1|A3|C|1402
9RHU|1|A3|G|1403

Current chains

Chain A3

28S rRNA

Nearby chains

Chain B2

60S ribosomal protein L7

Chain F3

Large ribosomal subunit protein uL4

Chain M2

eL18

Chain X2

60S ribosomal protein L29