HL_9RHU_055

3D structure

PDB id

9RHU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome in complex with eRF1-AAQ, stalled at the Stop codon in mutated F2A sequence

Experimental method

ELECTRON MICROSCOPY

Resolution

2.65 Å

Loop

Sequence

ACGUGCAAAU

Length

10 nucleotides

Bulged bases

9RHU|1|A3|U|1551, 9RHU|1|A3|A|1555, 9RHU|1|A3|A|1556

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RHU|1|A3|A|1548
9RHU|1|A3|C|1549
9RHU|1|A3|G|1550
9RHU|1|A3|U|1551
9RHU|1|A3|G|1552
9RHU|1|A3|C|1553
9RHU|1|A3|A|1554
9RHU|1|A3|A|1555
9RHU|1|A3|A|1556
9RHU|1|A3|U|1557

Current chains

Chain A3

28S rRNA

Nearby chains

Chain E3

Ribosomal protein L3

Chain G2

Choriogonadotropin subunit beta variant 1,Genome polyprotein,Genome polyprotein

Chain L2

Large ribosomal subunit protein uL22

Chain f2

Ribosomal protein L37