HL_9RHU_082

3D structure

PDB id

9RHU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome in complex with eRF1-AAQ, stalled at the Stop codon in mutated F2A sequence

Experimental method

ELECTRON MICROSCOPY

Resolution

2.65 Å

Loop

Sequence

(PSU)UUAAUUAAAA

Length

11 nucleotides

Bulged bases

9RHU|1|A3|A|3374, 9RHU|1|A3|A|3375, 9RHU|1|A3|U|3376, 9RHU|1|A3|A|3380

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RHU|1|A3|PSU|3371
9RHU|1|A3|U|3372
9RHU|1|A3|U|3373
9RHU|1|A3|A|3374
9RHU|1|A3|A|3375
9RHU|1|A3|U|3376
9RHU|1|A3|U|3377
9RHU|1|A3|A|3378
9RHU|1|A3|A|3379
9RHU|1|A3|A|3380
9RHU|1|A3|A|3381

Current chains

Chain A3

28S rRNA

Nearby chains

Chain D3

Large ribosomal subunit protein uL2

Chain G2

Choriogonadotropin subunit beta variant 1,Genome polyprotein,Genome polyprotein

Chain f2

Ribosomal protein L37