HL_9RHU_090

3D structure

PDB id

9RHU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome in complex with eRF1-AAQ, stalled at the Stop codon in mutated F2A sequence

Experimental method

ELECTRON MICROSCOPY

Resolution

2.65 Å

Loop

Sequence

UCAAACGGUA(6MZ)CG

Length

13 nucleotides

Bulged bases

9RHU|1|A3|A|3960, 9RHU|1|A3|C|3967

QA status

Modified nucleotides: 6MZ

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RHU|1|A3|U|3956
9RHU|1|A3|C|3957
9RHU|1|A3|A|3958
9RHU|1|A3|A|3959
9RHU|1|A3|A|3960
9RHU|1|A3|C|3961
9RHU|1|A3|G|3962
9RHU|1|A3|G|3963
9RHU|1|A3|U|3964
9RHU|1|A3|A|3965
9RHU|1|A3|6MZ|3966
9RHU|1|A3|C|3967
9RHU|1|A3|G|3968

Current chains

Chain A3

28S rRNA

Nearby chains

Chain E2

60S ribosomal protein L10

Chain P2

60S ribosomal protein L21

Chain X2

60S ribosomal protein L29