HL_9RHU_090
3D structure
- PDB id
- 9RHU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome in complex with eRF1-AAQ, stalled at the Stop codon in mutated F2A sequence
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.65 Å
Loop
- Sequence
- UCAAACGGUA(6MZ)CG
- Length
- 13 nucleotides
- Bulged bases
- 9RHU|1|A3|A|3960, 9RHU|1|A3|C|3967
- QA status
- Modified nucleotides: 6MZ
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9RHU_090 not in the Motif Atlas
- Homologous match to HL_8GLP_060
- Geometric discrepancy: 0.0296
- The information below is about HL_8GLP_060
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_02042.4
- Basepair signature
- cWW-tSH-tHH-tWW-F-F-F
- Number of instances in this motif group
- 14
Unit IDs
9RHU|1|A3|U|3956
9RHU|1|A3|C|3957
9RHU|1|A3|A|3958
9RHU|1|A3|A|3959
9RHU|1|A3|A|3960
9RHU|1|A3|C|3961
9RHU|1|A3|G|3962
9RHU|1|A3|G|3963
9RHU|1|A3|U|3964
9RHU|1|A3|A|3965
9RHU|1|A3|6MZ|3966
9RHU|1|A3|C|3967
9RHU|1|A3|G|3968
Current chains
- Chain A3
- 28S rRNA
Nearby chains
- Chain E2
- 60S ribosomal protein L10
- Chain P2
- 60S ribosomal protein L21
- Chain X2
- 60S ribosomal protein L29
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