HL_9RHU_110
3D structure
- PDB id
- 9RHU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome in complex with eRF1-AAQ, stalled at the Stop codon in mutated F2A sequence
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.65 Å
Loop
- Sequence
- G(PSU)GAAUU(OMG)CAGGACACAUUGAUC
- Length
- 23 nucleotides
- Bulged bases
- 9RHU|1|C3|C|81, 9RHU|1|C3|A|84, 9RHU|1|C3|U|86
- QA status
- Modified nucleotides: PSU, OMG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9RHU|1|C3|G|68
9RHU|1|C3|PSU|69
9RHU|1|C3|G|70
9RHU|1|C3|A|71
9RHU|1|C3|A|72
9RHU|1|C3|U|73
9RHU|1|C3|U|74
9RHU|1|C3|OMG|75
9RHU|1|C3|C|76
9RHU|1|C3|A|77
9RHU|1|C3|G|78
9RHU|1|C3|G|79
9RHU|1|C3|A|80
9RHU|1|C3|C|81
9RHU|1|C3|A|82
9RHU|1|C3|C|83
9RHU|1|C3|A|84
9RHU|1|C3|U|85
9RHU|1|C3|U|86
9RHU|1|C3|G|87
9RHU|1|C3|A|88
9RHU|1|C3|U|89
9RHU|1|C3|C|90
Current chains
- Chain C3
- 5.8S rRNA
Nearby chains
- Chain A3
- Large subunit ribosomal RNA; LSU rRNA
- Chain U2
- Ribosomal protein L26
- Chain d2
- 60S ribosomal protein L35
- Chain f2
- Ribosomal protein L37
- Chain h2
- 60S ribosomal protein L39-like
Coloring options: