HL_9ROV_003
3D structure
- PDB id
- 9ROV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Assembly intermediate of human mitochondrial ribosome small subunit bound to METTL15 and RBFA (Inward conformation) (State M2)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CACCACG
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9ROV_003 not in the Motif Atlas
- Geometric match to HL_4AOB_001
- Geometric discrepancy: 0.37
- The information below is about HL_4AOB_001
- Detailed Annotation
- Pseudoknot geometry
- Broad Annotation
- No text annotation
- Motif group
- HL_30680.5
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 16
Unit IDs
9ROV|1|A|C|734
9ROV|1|A|A|735
9ROV|1|A|C|736
9ROV|1|A|C|737
9ROV|1|A|A|738
9ROV|1|A|C|739
9ROV|1|A|G|740
Current chains
- Chain A
- 12S mitochondrial rRNA
Nearby chains
- Chain 0
- 28S ribosomal protein S34, mitochondrial
- Chain M
- 28S ribosomal protein S16, mitochondrial
- Chain U
- 28S ribosomal protein S26, mitochondrial
Coloring options: