HL_9ROV_011
3D structure
- PDB id
- 9ROV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Assembly intermediate of human mitochondrial ribosome small subunit bound to METTL15 and RBFA (Inward conformation) (State M2)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GA(5MU)UAGAUACC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: 5MU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9ROV_011 not in the Motif Atlas
- Homologous match to HL_6CZR_088
- Geometric discrepancy: 0.5746
- The information below is about HL_6CZR_088
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75293.4
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 13
Unit IDs
9ROV|1|A|G|1074
9ROV|1|A|A|1075
9ROV|1|A|5MU|1076
9ROV|1|A|U|1077
9ROV|1|A|A|1078
9ROV|1|A|G|1079
9ROV|1|A|A|1080
9ROV|1|A|U|1081
9ROV|1|A|A|1082
9ROV|1|A|C|1083
9ROV|1|A|C|1084
Current chains
- Chain A
- 12S mitochondrial rRNA
Nearby chains
- Chain I
- 28S ribosomal protein S11, mitochondrial
- Chain a
- Putative ribosome-binding factor A, mitochondrial
- Chain b
- 12S rRNA N4-methylcytidine (m4C) methyltransferase
Coloring options: