HL_9RPV_058

3D structure

PDB id

9RPV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the ZAK-bound human disome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.35 Å

Loop

Sequence

GGGAACGGGC

Length

10 nucleotides

Bulged bases

9RPV|1|L5|A|3876, 9RPV|1|L5|A|3877, 9RPV|1|L5|C|3878

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RPV|1|L5|G|3873
9RPV|1|L5|G|3874
9RPV|1|L5|G|3875
9RPV|1|L5|A|3876
9RPV|1|L5|A|3877
9RPV|1|L5|C|3878
9RPV|1|L5|G|3879
9RPV|1|L5|G|3880
9RPV|1|L5|G|3881
9RPV|1|L5|C|3882

Current chains

Chain L5

28S rRNA of the collided 80S

Nearby chains

Chain LB

60S ribosomal protein L3

Chain Le

60S ribosomal protein L32