HL_9RPV_068

3D structure

PDB id

9RPV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the ZAK-bound human disome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.35 Å

Loop

Sequence

AGCAGAAU

Length

8 nucleotides

Bulged bases

9RPV|1|L5|G|4475

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RPV|1|L5|A|4474
9RPV|1|L5|G|4475
9RPV|1|L5|C|4476
9RPV|1|L5|A|4477
9RPV|1|L5|G|4478
9RPV|1|L5|A|4479
9RPV|1|L5|A|4480
9RPV|1|L5|U|4481

Current chains

Chain L5

28S rRNA of the collided 80S

Nearby chains

Chain LH

60S ribosomal protein L9

Chain Lm

Ubiquitin-60S ribosomal protein L40