HL_9RPV_124

3D structure

PDB id

9RPV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the ZAK-bound human disome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.35 Å

Loop

Sequence

CGCAGCAG

Length

8 nucleotides

Bulged bases

9RPV|1|M5|C|2794, 9RPV|1|M5|G|2796, 9RPV|1|M5|A|2798

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RPV|1|M5|C|2792
9RPV|1|M5|G|2793
9RPV|1|M5|C|2794
9RPV|1|M5|A|2795
9RPV|1|M5|G|2796
9RPV|1|M5|C|2797
9RPV|1|M5|A|2798
9RPV|1|M5|G|2799

Current chains

Chain M5

28S rRNA of the stalled 80S

Nearby chains

Chain MC

60S ribosomal protein L4

Chain MP

60S ribosomal protein L17

Chain Mj

Large ribosomal subunit protein eL37

Chain Ml

60S ribosomal protein L39