HL_9RPV_172

3D structure

PDB id

9RPV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the ZAK-bound human disome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.35 Å

Loop

Sequence

UGUUCAAAG

Length

9 nucleotides

Bulged bases

9RPV|1|S2|G|821

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RPV|1|S2|U|820
9RPV|1|S2|G|821
9RPV|1|S2|U|822
9RPV|1|S2|U|823
9RPV|1|S2|C|824
9RPV|1|S2|A|825
9RPV|1|S2|A|826
9RPV|1|S2|A|827
9RPV|1|S2|G|828

Current chains

Chain S2

18S rRNA of the collided 80S

Nearby chains

Chain RB

40S ribosomal protein S3a

Chain SE

Small ribosomal subunit protein eS4, X isoform

Chain SJ

40S ribosomal protein S9

Chain SY

40S ribosomal protein S24