HL_9RPV_174
3D structure
- PDB id
- 9RPV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the ZAK-bound human disome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.35 Å
Loop
- Sequence
- AGGUGAAAUU
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9RPV_174 not in the Motif Atlas
- Homologous match to HL_9H3G_093
- Geometric discrepancy: 0.178
- The information below is about HL_9H3G_093
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_38491.5
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 16
Unit IDs
9RPV|1|S2|A|957
9RPV|1|S2|G|958
9RPV|1|S2|G|959
9RPV|1|S2|U|960
9RPV|1|S2|G|961
9RPV|1|S2|A|962
9RPV|1|S2|A|963
9RPV|1|S2|A|964
9RPV|1|S2|U|965
9RPV|1|S2|U|966
Current chains
- Chain S2
- 18S rRNA of the collided 80S
Nearby chains
- Chain A4
- mRNA of the collided 80S
- Chain SO
- 40S ribosomal protein S14
Coloring options: