HL_9RPV_174

3D structure

PDB id

9RPV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the ZAK-bound human disome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.35 Å

Loop

Sequence

AGGUGAAAUU

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RPV|1|S2|A|957
9RPV|1|S2|G|958
9RPV|1|S2|G|959
9RPV|1|S2|U|960
9RPV|1|S2|G|961
9RPV|1|S2|A|962
9RPV|1|S2|A|963
9RPV|1|S2|A|964
9RPV|1|S2|U|965
9RPV|1|S2|U|966

Current chains

Chain S2

18S rRNA of the collided 80S

Nearby chains

Chain A4

mRNA of the collided 80S

Chain SO

40S ribosomal protein S14