HL_9RPV_201

3D structure

PDB id

9RPV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the ZAK-bound human disome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.35 Å

Loop

Sequence

ACU(PSU)(PSU)AA(A2M)UCCUU

Length

13 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: PSU, A2M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RPV|1|S3|A|569
9RPV|1|S3|C|570
9RPV|1|S3|U|571
9RPV|1|S3|PSU|572
9RPV|1|S3|PSU|573
9RPV|1|S3|A|574
9RPV|1|S3|A|575
9RPV|1|S3|A2M|576
9RPV|1|S3|U|577
9RPV|1|S3|C|578
9RPV|1|S3|C|579
9RPV|1|S3|U|580
9RPV|1|S3|U|581

Current chains

Chain S3

18S rRNA of the stalled 80S

Nearby chains

Chain RJ

40S ribosomal protein S9

Chain RY

40S ribosomal protein S24