HL_9RPV_203
3D structure
- PDB id
- 9RPV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the ZAK-bound human disome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.35 Å
Loop
- Sequence
- UG(PSU)UCAAAG
- Length
- 9 nucleotides
- Bulged bases
- 9RPV|1|S3|G|821
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9RPV_203 not in the Motif Atlas
- Homologous match to HL_9PN5_092
- Geometric discrepancy: 0.096
- The information below is about HL_9PN5_092
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_11974.5
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 21
Unit IDs
9RPV|1|S3|U|820
9RPV|1|S3|G|821
9RPV|1|S3|PSU|822
9RPV|1|S3|U|823
9RPV|1|S3|C|824
9RPV|1|S3|A|825
9RPV|1|S3|A|826
9RPV|1|S3|A|827
9RPV|1|S3|G|828
Current chains
- Chain S3
- 18S rRNA of the stalled 80S
Nearby chains
- Chain RE
- Small ribosomal subunit protein eS4, X isoform
- Chain RJ
- 40S ribosomal protein S9
- Chain RY
- 40S ribosomal protein S24
Coloring options: