HL_9RPV_204
3D structure
- PDB id
- 9RPV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the ZAK-bound human disome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.35 Å
Loop
- Sequence
- CCCGAGCCG
- Length
- 9 nucleotides
- Bulged bases
- 9RPV|1|S3|C|839, 9RPV|1|S3|C|840
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9RPV_204 not in the Motif Atlas
- Geometric match to HL_8GLP_100
- Geometric discrepancy: 0.1371
- The information below is about HL_8GLP_100
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_68791.2
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
9RPV|1|S3|C|833
9RPV|1|S3|C|834
9RPV|1|S3|C|835
9RPV|1|S3|G|836
9RPV|1|S3|A|837
9RPV|1|S3|G|838
9RPV|1|S3|C|839
9RPV|1|S3|C|840
9RPV|1|S3|G|841
Current chains
- Chain S3
- 18S rRNA of the stalled 80S
Nearby chains
- Chain RE
- Small ribosomal subunit protein eS4, X isoform
- Chain RY
- 40S ribosomal protein S24
Coloring options: