HL_9RPV_206
3D structure
- PDB id
- 9RPV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the ZAK-bound human disome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.35 Å
Loop
- Sequence
- AGGUGAAAU(PSU)
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9RPV_206 not in the Motif Atlas
- Homologous match to HL_9H3G_093
- Geometric discrepancy: 0.0906
- The information below is about HL_9H3G_093
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_38491.5
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 16
Unit IDs
9RPV|1|S3|A|957
9RPV|1|S3|G|958
9RPV|1|S3|G|959
9RPV|1|S3|U|960
9RPV|1|S3|G|961
9RPV|1|S3|A|962
9RPV|1|S3|A|963
9RPV|1|S3|A|964
9RPV|1|S3|U|965
9RPV|1|S3|PSU|966
Current chains
- Chain S3
- 18S rRNA of the stalled 80S
Nearby chains
- Chain A5
- mRNA of the stalled 80S
- Chain E5
- Transfer RNA; tRNA
- Chain RB
- 40S ribosomal protein S3a
- Chain RO
- 40S ribosomal protein S14
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