3D structure

PDB id
9RTU (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the 70S-EF-G(P610L)-GDP-Pi ribosome complex with tRNAs in hybrid state 1 (H1-EF-G(P610L)-GDP-Pi)
Experimental method
ELECTRON MICROSCOPY
Resolution
3 Å

Loop

Sequence
UGAAUGGAAG
Length
10 nucleotides
Bulged bases
9RTU|1|A|A|2406
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_9RTU_058 not in the Motif Atlas
Geometric match to HL_8B0X_086
Geometric discrepancy: 0.1144
The information below is about HL_8B0X_086
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_51853.2
Basepair signature
cWW-tSH-F-F-F-F-F
Number of instances in this motif group
6

Unit IDs

9RTU|1|A|U|2404
9RTU|1|A|G|2405
9RTU|1|A|A|2406
9RTU|1|A|A|2407
9RTU|1|A|U|2408
9RTU|1|A|G|2409
9RTU|1|A|G|2410
9RTU|1|A|A|2411
9RTU|1|A|A|2412
9RTU|1|A|G|2413

Current chains

Chain A
23S ribosomal RNA

Nearby chains

Chain L
50S ribosomal protein L15

Coloring options:


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