3D structure

PDB id
9RTU (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the 70S-EF-G(P610L)-GDP-Pi ribosome complex with tRNAs in hybrid state 1 (H1-EF-G(P610L)-GDP-Pi)
Experimental method
ELECTRON MICROSCOPY
Resolution
3 Å

Loop

Sequence
UGAAGUAG
Length
8 nucleotides
Bulged bases
9RTU|1|A|G|2529
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_9RTU_060 not in the Motif Atlas
Geometric match to HL_8B0X_088
Geometric discrepancy: 0.1208
The information below is about HL_8B0X_088
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_46665.2
Basepair signature
cWW-F-F-F-F-F
Number of instances in this motif group
11

Unit IDs

9RTU|1|A|U|2528
9RTU|1|A|G|2529
9RTU|1|A|A|2530
9RTU|1|A|A|2531
9RTU|1|A|G|2532
9RTU|1|A|U|2533
9RTU|1|A|A|2534
9RTU|1|A|G|2535

Current chains

Chain A
23S ribosomal RNA

Nearby chains

Chain 4
50S ribosomal protein L36
Chain G
50S ribosomal protein L6
Chain x
Elongation factor G

Coloring options:


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